RNA–Protein interactions for RNA: YER017C

AFG3, Transcript of Mitochondrial inner membrane m-AAA protease component, yeast

Gene AFG3, Length 2,286 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG3	YER017C	SDS23	P53172	527 aa		5.78	□□□□□ -1.48
AFG3	YER017C	SWT21	P53873	357 aa	Predicted RBP	5.78	□□□□□ -1.48
AFG3	YER017C	YNL092W	P53934	400 aa		5.78	□□□□□ -1.48
AFG3	YER017C	GPP2	P40106	250 aa	Known RBP	5.77	□□□□□ -1.49
AFG3	YER017C	IMP2	P46972	177 aa		5.77	□□□□□ -1.49
AFG3	YER017C	DAD4	P69851	72 aa		5.77	□□□□□ -1.49
AFG3	YER017C	PAU23	Q07987	124 aa		5.77	□□□□□ -1.49
AFG3	YER017C	PAU17	Q12370	124 aa		5.77	□□□□□ -1.49
AFG3	YER017C	PRP8	P33334	2413 aa	Known RBP	5.77	□□□□□ -1.49
AFG3	YER017C	VMA11	P32842	164 aa		5.77	□□□□□ -1.49
AFG3	YER017C	RPF1	P38805	295 aa	Known RBP	5.77	□□□□□ -1.49
AFG3	YER017C	MBB1	P39534	108 aa		5.77	□□□□□ -1.49
AFG3	YER017C	YMR141C	P40211	102 aa		5.77	□□□□□ -1.49
AFG3	YER017C	YFR045W	P43617	309 aa		5.77	□□□□□ -1.49
AFG3	YER017C	MRPL31	P14063	131 aa	Predicted RBP	5.76	□□□□□ -1.49
AFG3	YER017C	ZRT1	P32804	376 aa		5.76	□□□□□ -1.49
AFG3	YER017C	GSP1	P32835	219 aa	Known RBP	5.76	□□□□□ -1.49
AFG3	YER017C	GSP2	P32836	220 aa	Known RBP	5.76	□□□□□ -1.49
AFG3	YER017C	PAU16	P35994	123 aa		5.76	□□□□□ -1.49
AFG3	YER017C	PRE3	P38624	215 aa		5.76	□□□□□ -1.49
AFG3	YER017C	GLE2	P40066	365 aa		5.76	□□□□□ -1.49
AFG3	YER017C	PRE5	P40302	234 aa	Known RBP	5.76	□□□□□ -1.49
AFG3	YER017C	RPA43	P46669	326 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YJL027C	P47063	138 aa	Predicted RBP	5.76	□□□□□ -1.49
AFG3	YER017C	ARC18	Q05933	178 aa	Known RBP	5.76	□□□□□ -1.49
AFG3	YER017C	YDR215C	Q12240	137 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YER190C-B	P0CX94	160 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YEL077W-A	P0CX95	160 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YGR296C-B	P0CX96	160 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YPL283W-B	P0CX97	160 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YPR204C-A	P0CX98	160 aa		5.76	□□□□□ -1.49
AFG3	YER017C	YGL015C	P33199	130 aa		5.76	□□□□□ -1.49
AFG3	YER017C	ATG39	Q06159	398 aa		5.76	□□□□□ -1.49
AFG3	YER017C	DAD1	Q12248	94 aa		5.76	□□□□□ -1.49
AFG3	YER017C	CPR1	P14832	162 aa	Known RBP	5.75	□□□□□ -1.49
AFG3	YER017C	YKL102C	P34249	101 aa		5.75	□□□□□ -1.49
AFG3	YER017C	TRI1	Q05024	226 aa		5.75	□□□□□ -1.49
AFG3	YER017C	WIP1	Q2V2P8	89 aa		5.75	□□□□□ -1.49
AFG3	YER017C	RPL23A	P0CX41	137 aa	Known RBP	5.74	□□□□□ -1.49
AFG3	YER017C	RPL23B	P0CX42	137 aa	Known RBP	5.74	□□□□□ -1.49
AFG3	YER017C	SEC11	P15367	167 aa		5.74	□□□□□ -1.49
AFG3	YER017C	POP7	P38291	140 aa		5.74	□□□□□ -1.49
AFG3	YER017C	YLR050C	Q12155	161 aa	Known RBP	5.74	□□□□□ -1.49
AFG3	YER017C	MBF1	O14467	151 aa	Known RBP	5.74	□□□□□ -1.49
AFG3	YER017C	BNA1	P47096	177 aa		5.74	□□□□□ -1.49
AFG3	YER017C	UBC7	Q02159	165 aa		5.74	□□□□□ -1.49
AFG3	YER017C	FSF1	Q12029	327 aa	Known RBP	5.74	□□□□□ -1.49
AFG3	YER017C	SPO24	Q3E752	67 aa		5.74	□□□□□ -1.49
AFG3	YER017C	CYC3	P06182	269 aa		5.73	□□□□□ -1.49
AFG3	YER017C	TIM18	Q08749	192 aa		5.73	□□□□□ -1.49
AFG3	YER017C	YPL257W	Q08974	193 aa		5.73	□□□□□ -1.49
AFG3	YER017C	PAU7	P39545	55 aa		5.73	□□□□□ -1.49
AFG3	YER017C	SEC72	P39742	193 aa	Known RBP	5.73	□□□□□ -1.49
AFG3	YER017C	MRPL20	P22354	195 aa	Predicted RBP	5.72	□□□□□ -1.49
AFG3	YER017C	YNL200C	P40165	246 aa	Known RBP	5.72	□□□□□ -1.49
AFG3	YER017C	YMR181C	Q03231	154 aa		5.72	□□□□□ -1.49
AFG3	YER017C	MDM10	P18409	493 aa		5.72	□□□□□ -1.49
AFG3	YER017C	HAC1	P41546	238 aa		5.72	□□□□□ -1.49
AFG3	YER017C	YGL118C	P53132	145 aa		5.72	□□□□□ -1.49
AFG3	YER017C	YMR317W	Q04893	1140 aa		5.72	□□□□□ -1.49
AFG3	YER017C	YNL198C	P40166	100 aa		5.71	□□□□□ -1.5
AFG3	YER017C	ABM1	P47146	123 aa		5.71	□□□□□ -1.5
AFG3	YER017C	YGL230C	P53074	147 aa		5.71	□□□□□ -1.5
AFG3	YER017C	YGR017W	P53210	297 aa		5.71	□□□□□ -1.5
AFG3	YER017C	ATG33	Q06485	197 aa		5.71	□□□□□ -1.5
AFG3	YER017C	YPL162C	Q12042	273 aa		5.71	□□□□□ -1.5
AFG3	YER017C	FEN2	P25621	512 aa	Known RBP	5.71	□□□□□ -1.5
AFG3	YER017C	POR2	P40478	281 aa		5.71	□□□□□ -1.5
AFG3	YER017C	ISU2	Q12056	156 aa		5.71	□□□□□ -1.5
AFG3	YER017C	Q0297	Q9ZZV8	51 aa		5.71	□□□□□ -1.5
AFG3	YER017C	CIN5	P40917	295 aa		5.7	□□□□□ -1.5
AFG3	YER017C	YGR219W	P53307	113 aa		5.7	□□□□□ -1.5
AFG3	YER017C	YML122C	Q03207	126 aa		5.7	□□□□□ -1.5
AFG3	YER017C	GTO3	Q04806	366 aa		5.7	□□□□□ -1.5
AFG3	YER017C	UTP23	Q12339	254 aa	Known RBP	5.7	□□□□□ -1.5
AFG3	YER017C	CDC43	P18898	376 aa		5.69	□□□□□ -1.5
AFG3	YER017C	MSL1	P40567	111 aa	Predicted RBP	5.69	□□□□□ -1.5
AFG3	YER017C	BRP1	P53194	125 aa		5.69	□□□□□ -1.5
AFG3	YER017C	RPL15B	P54780	204 aa	Predicted RBP	5.69	□□□□□ -1.5
AFG3	YER017C	YOL160W	Q08321	113 aa		5.69	□□□□□ -1.5
AFG3	YER017C	SLO1	Q3E784	85 aa		5.69	□□□□□ -1.5
AFG3	YER017C	LCB3	P47013	409 aa		5.69	□□□□□ -1.5
AFG3	YER017C	YLR342W-A	Q3E810	57 aa		5.69	□□□□□ -1.5
AFG3	YER017C	MEC1	P38111	2368 aa		5.69	□□□□□ -1.5
AFG3	YER017C	PRS4	P38063	326 aa	Predicted RBP	5.68	□□□□□ -1.5
AFG3	YER017C	YGR025W	P53216	100 aa		5.68	□□□□□ -1.5
AFG3	YER017C	CAB4	P53332	305 aa		5.68	□□□□□ -1.5
AFG3	YER017C	CNL1	Q06333	122 aa		5.68	□□□□□ -1.5
AFG3	YER017C	CPT1	P17898	393 aa		5.68	□□□□□ -1.5
AFG3	YER017C	YKR070W	P36151	352 aa	Known RBP	5.68	□□□□□ -1.5
AFG3	YER017C	ARO2	P28777	376 aa	Known RBP	5.67	□□□□□ -1.5
AFG3	YER017C	CMC1	P36064	111 aa		5.67	□□□□□ -1.5
AFG3	YER017C	YPI1	P43587	155 aa		5.67	□□□□□ -1.5
AFG3	YER017C	URA2	P07259	2214 aa	Known RBP	5.67	□□□□□ -1.5
AFG3	YER017C	TOR1	P35169	2470 aa		5.67	□□□□□ -1.5
AFG3	YER017C	RPL43A	P0CX25	92 aa	Known RBP	5.67	□□□□□ -1.5
AFG3	YER017C	RPL43B	P0CX26	92 aa		5.67	□□□□□ -1.5
AFG3	YER017C	MIC12	P38341	106 aa		5.67	□□□□□ -1.5
AFG3	YER017C	YNL184C	P53876	108 aa		5.67	□□□□□ -1.5
AFG3	YER017C	GEP3	Q08622	556 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms