RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C PAU5P43575 122 aa8.25□□□□□ -1.09
VPS60YDR486C YDL183CP48569 320 aa8.25□□□□□ -1.09
VPS60YDR486C YGL185CP53100 379 aa8.25□□□□□ -1.09
VPS60YDR486C YGR026WP53217 278 aa8.25□□□□□ -1.09
VPS60YDR486C DAD1Q12248 94 aa8.25□□□□□ -1.09
VPS60YDR486C YNL146C-AQ3E7Z1 64 aa8.25□□□□□ -1.09
VPS60YDR486C RTG1P32607 177 aa8.24□□□□□ -1.09
VPS60YDR486C YFR045WP43617 309 aa8.24□□□□□ -1.09
VPS60YDR486C HAM1P47119 197 aaKnown RBP8.23□□□□□ -1.09
VPS60YDR486C TRI1Q05024 226 aa8.23□□□□□ -1.09
VPS60YDR486C CUP2P15315 225 aa8.22□□□□□ -1.09
VPS60YDR486C DAD2P36162 133 aa8.22□□□□□ -1.09
VPS60YDR486C ECM33P38248 429 aaKnown RBP8.22□□□□□ -1.09
VPS60YDR486C MIC26P50087 233 aa8.22□□□□□ -1.09
VPS60YDR486C GIM5Q04493 163 aa8.22□□□□□ -1.09
VPS60YDR486C YLR342W-AQ3E810 57 aa8.22□□□□□ -1.09
VPS60YDR486C YNR034W-AQ3E841 98 aa8.22□□□□□ -1.09
VPS60YDR486C MIX23P38162 196 aa8.21□□□□□ -1.1
VPS60YDR486C MPC2P38857 129 aa8.21□□□□□ -1.1
VPS60YDR486C GET2P40056 285 aa8.21□□□□□ -1.1
VPS60YDR486C SPI1P40092 148 aa8.21□□□□□ -1.1
VPS60YDR486C DYN1P36022 4092 aa8.2□□□□□ -1.1
VPS60YDR486C PAU19P0CE85 124 aa8.2□□□□□ -1.1
VPS60YDR486C PAU21P0CE86 164 aa8.2□□□□□ -1.1
VPS60YDR486C PAU22P0CE87 164 aa8.2□□□□□ -1.1
VPS60YDR486C HMRA1P0CY11 126 aa8.2□□□□□ -1.1
VPS60YDR486C PAU3P25610 124 aa8.2□□□□□ -1.1
VPS60YDR486C MIG1P27705 504 aa8.2□□□□□ -1.1
VPS60YDR486C PAM17P36147 197 aa8.2□□□□□ -1.1
VPS60YDR486C YHR022CP38763 256 aa8.2□□□□□ -1.1
VPS60YDR486C YER135CP40082 130 aa8.2□□□□□ -1.1
VPS60YDR486C ALG13P53178 202 aa8.2□□□□□ -1.1
VPS60YDR486C YPL162CQ12042 273 aa8.2□□□□□ -1.1
VPS60YDR486C MRPL31P14063 131 aaPredicted RBP8.19□□□□□ -1.1
VPS60YDR486C CPT1P17898 393 aa8.19□□□□□ -1.1
VPS60YDR486C YMR244WQ04018 355 aa8.19□□□□□ -1.1
VPS60YDR486C CCW12Q12127 133 aa8.19□□□□□ -1.1
VPS60YDR486C UTP23Q12339 254 aaKnown RBP8.19□□□□□ -1.1
VPS60YDR486C MRPL33P20084 86 aa8.18□□□□□ -1.1
VPS60YDR486C MIG3P39943 394 aa8.17□□□□□ -1.1
VPS60YDR486C IRC22P40006 225 aa8.17□□□□□ -1.1
VPS60YDR486C YDR274CP87283 123 aa8.17□□□□□ -1.1
VPS60YDR486C YOL085CQ99345 113 aa8.17□□□□□ -1.1
VPS60YDR486C MDM10P18409 493 aa8.16□□□□□ -1.1
VPS60YDR486C RPB11P38902 120 aa8.16□□□□□ -1.1
VPS60YDR486C YJR096WP47137 282 aa8.16□□□□□ -1.1
VPS60YDR486C VPS71Q03433 280 aa8.16□□□□□ -1.1
VPS60YDR486C MRPS8Q03799 155 aa8.16□□□□□ -1.1
VPS60YDR486C GRH1Q04410 372 aaKnown RBP8.16□□□□□ -1.1
VPS60YDR486C YPR063CQ12160 140 aa8.16□□□□□ -1.1
VPS60YDR486C UPS3Q04006 179 aa8.15□□□□□ -1.1
VPS60YDR486C ATP16Q12165 160 aa8.15□□□□□ -1.1
VPS60YDR486C YDR215CQ12240 137 aa8.15□□□□□ -1.1
VPS60YDR486C RPL12AP0CX53 165 aaKnown RBP8.14□□□□□ -1.11
VPS60YDR486C RPL12BP0CX54 165 aa8.14□□□□□ -1.11
VPS60YDR486C SUR2P38992 349 aa8.14□□□□□ -1.11
VPS60YDR486C CSM4Q08955 156 aa8.14□□□□□ -1.11
VPS60YDR486C AIR2Q12476 344 aaKnown RBP8.14□□□□□ -1.11
VPS60YDR486C POR1P04840 283 aaKnown RBP8.13□□□□□ -1.11
VPS60YDR486C TIM22Q12328 207 aa8.13□□□□□ -1.11
VPS60YDR486C COX16P47081 118 aa8.12□□□□□ -1.11
VPS60YDR486C ATG33Q06485 197 aa8.12□□□□□ -1.11
VPS60YDR486C PAU7P39545 55 aa8.11□□□□□ -1.11
VPS60YDR486C ARL3Q02804 198 aa8.11□□□□□ -1.11
VPS60YDR486C YCR024C-BQ3E7Z8 88 aa8.11□□□□□ -1.11
VPS60YDR486C VAR1P02381 398 aa8.1□□□□□ -1.11
VPS60YDR486C VMA16P23968 213 aa8.1□□□□□ -1.11
VPS60YDR486C YFR035CP43608 114 aa8.1□□□□□ -1.11
VPS60YDR486C SDS23P53172 527 aa8.1□□□□□ -1.11
VPS60YDR486C YGR017WP53210 297 aa8.1□□□□□ -1.11
VPS60YDR486C THG1P53215 237 aaKnown RBP8.1□□□□□ -1.11
VPS60YDR486C ARC18Q05933 178 aaKnown RBP8.1□□□□□ -1.11
VPS60YDR486C AGA1P32323 725 aa8.09□□□□□ -1.11
VPS60YDR486C YGR149WP48236 432 aa8.09□□□□□ -1.11
VPS60YDR486C CYT2Q00873 224 aa8.09□□□□□ -1.11
VPS60YDR486C MSC3Q05812 728 aa8.09□□□□□ -1.11
VPS60YDR486C DIA1P54005 336 aa8.08□□□□□ -1.12
VPS60YDR486C GTO3Q04806 366 aa8.08□□□□□ -1.12
VPS60YDR486C RPS22BQ3E7Y3 130 aaKnown RBP8.08□□□□□ -1.12
VPS60YDR486C RPL27AP0C2H6 136 aaKnown RBP8.07□□□□□ -1.12
VPS60YDR486C TY1A-HP0C2I4 478 aaKnown RBP8.07□□□□□ -1.12
VPS60YDR486C RPL23AP0CX41 137 aaKnown RBP8.07□□□□□ -1.12
VPS60YDR486C RPL23BP0CX42 137 aaKnown RBP8.07□□□□□ -1.12
VPS60YDR486C DUO1P53168 247 aaKnown RBP8.07□□□□□ -1.12
VPS60YDR486C GPI19Q04082 140 aa8.07□□□□□ -1.12
VPS60YDR486C POM33Q12164 279 aa8.07□□□□□ -1.12
VPS60YDR486C SEC4P07560 215 aaKnown RBP8.06□□□□□ -1.12
VPS60YDR486C ZRT1P32804 376 aa8.06□□□□□ -1.12
VPS60YDR486C MRPL28P36527 147 aa8.06□□□□□ -1.12
VPS60YDR486C YHR140WP38842 239 aa8.06□□□□□ -1.12
VPS60YDR486C KEG1P43614 200 aa8.06□□□□□ -1.12
VPS60YDR486C FSF1Q12029 327 aaKnown RBP8.06□□□□□ -1.12
VPS60YDR486C YBR200W-AQ3E755 54 aa8.06□□□□□ -1.12
VPS60YDR486C RPL2AP0CX45 254 aaKnown RBP8.05□□□□□ -1.12
VPS60YDR486C RPL2BP0CX46 254 aaKnown RBP8.05□□□□□ -1.12
VPS60YDR486C RPS11AP0CX47 156 aaKnown RBP8.05□□□□□ -1.12
VPS60YDR486C RPS11BP0CX48 156 aaKnown RBP8.05□□□□□ -1.12
VPS60YDR486C YLR281CQ05863 155 aa8.05□□□□□ -1.12
VPS60YDR486C YLR122CQ12312 125 aa8.05□□□□□ -1.12
VPS60YDR486C Q0255P03881 472 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms