RNA–Protein interactions for RNA: YDR381W

YRA1, Transcript of Nuclear polyadenylated RNA-binding protein, yeast

Gene YRA1, Length 681 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRA1	YDR381W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.28	□□□□□ -1.72
YRA1	YDR381W	TY1A-OL	Q92392	440 aa	Known RBP	4.28	□□□□□ -1.72
YRA1	YDR381W	POF1	P25576	258 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	ATG8	P38182	117 aa	RIP-Chip data	4.27	□□□□□ -1.73	not detected
YRA1	YDR381W	YHR022C	P38763	256 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	HSP10	P38910	106 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	VMA21	P41806	77 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	YDL183C	P48569	320 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	YGL185C	P53100	379 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	ATP19	P81451	68 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	MRPS8	Q03799	155 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	CCW12	Q12127	133 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	YCL001W-B	Q96VH2	84 aa		4.27	□□□□□ -1.73
YRA1	YDR381W	TIR1	P10863	254 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	CPT1	P17898	393 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	SRP14	P38985	146 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	PGD1	P40356	397 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	YFR045W	P43617	309 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	YLR342W-A	Q3E810	57 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	YOL085C	Q99345	113 aa		4.26	□□□□□ -1.73
YRA1	YDR381W	NHP6A	P11632	93 aa	Known RBP	4.25	□□□□□ -1.73
YRA1	YDR381W	YGL010W	P25338	174 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	MLF3	P32047	452 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	QRI5	P32344	111 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	NRG2	P38082	220 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	SPI1	P40092	148 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	YJR096W	P47137	282 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	MGA1	P53050	456 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	COX12	Q01519	83 aa		4.25	□□□□□ -1.73
YRA1	YDR381W	DAD2	P36162	133 aa		4.24	□□□□□ -1.73
YRA1	YDR381W	APS2	Q00381	147 aa		4.24	□□□□□ -1.73
YRA1	YDR381W	GIM5	Q04493	163 aa		4.24	□□□□□ -1.73
YRA1	YDR381W	UTP23	Q12339	254 aa	Known RBP	4.24	□□□□□ -1.73
YRA1	YDR381W	YLR118C	Q12354	227 aa		4.24	□□□□□ -1.73
YRA1	YDR381W	TMA17	Q12513	150 aa		4.24	□□□□□ -1.73
YRA1	YDR381W	Q0255	P03881	472 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	RPS11A	P0CX47	156 aa	Known RBP	4.23	□□□□□ -1.73
YRA1	YDR381W	RPS11B	P0CX48	156 aa	Known RBP	4.23	□□□□□ -1.73
YRA1	YDR381W	RPL12A	P0CX53	165 aa	Known RBP	4.23	□□□□□ -1.73
YRA1	YDR381W	RPL12B	P0CX54	165 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	CUP2	P15315	225 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	PAU15	P40585	124 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	MOG1	P47123	218 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	DAN1	P47178	298 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	DIA1	P54005	336 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	UPS3	Q04006	179 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	ZEO1	Q08245	113 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	CSM4	Q08955	156 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	YDR215C	Q12240	137 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	TIM22	Q12328	207 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	SNU23	Q12368	194 aa	Predicted RBP	4.23	□□□□□ -1.73
YRA1	YDR381W	YOP1	Q12402	180 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	YNR034W-A	Q3E841	98 aa		4.23	□□□□□ -1.73
YRA1	YDR381W	VAR1	P02381	398 aa		4.22	□□□□□ -1.73
YRA1	YDR381W	RPL2A	P0CX45	254 aa	Known RBP	4.22	□□□□□ -1.73
YRA1	YDR381W	RPL2B	P0CX46	254 aa	Known RBP	4.22	□□□□□ -1.73
YRA1	YDR381W	MRPL31	P14063	131 aa	Predicted RBP	4.22	□□□□□ -1.73
YRA1	YDR381W	VMA16	P23968	213 aa		4.22	□□□□□ -1.73
YRA1	YDR381W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
YRA1	YDR381W	RPB11	P38902	120 aa		4.22	□□□□□ -1.73
YRA1	YDR381W	NSE4	P43124	402 aa		4.22	□□□□□ -1.73
YRA1	YDR381W	KEG1	P43614	200 aa		4.22	□□□□□ -1.73
YRA1	YDR381W	HMRA1	P0CY11	126 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	AUA1	P32450	94 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	PAM17	P36147	197 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	MIX23	P38162	196 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	YBR013C	P38215	129 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	IRC22	P40006	225 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	PAU5	P43575	122 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	YFR035C	P43608	114 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	COX16	P47081	118 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	DUO1	P53168	247 aa	Known RBP	4.21	□□□□□ -1.74
YRA1	YDR381W	YGR017W	P53210	297 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	HHO1	P53551	258 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	SCW10	Q04951	389 aa		4.21	□□□□□ -1.74
YRA1	YDR381W	RDS3	Q06835	107 aa	Predicted RBP	4.21	□□□□□ -1.74
YRA1	YDR381W	RPS8A	P0CX39	200 aa	Known RBP	4.2	□□□□□ -1.74
YRA1	YDR381W	RPS8B	P0CX40	200 aa	Known RBP	4.2	□□□□□ -1.74
YRA1	YDR381W	YCR001W	P25347	104 aa		4.2	□□□□□ -1.74
YRA1	YDR381W	AGA1	P32323	725 aa		4.2	□□□□□ -1.74
YRA1	YDR381W	THG1	P53215	237 aa	Known RBP	4.2	□□□□□ -1.74
YRA1	YDR381W	YGR026W	P53217	278 aa		4.2	□□□□□ -1.74
YRA1	YDR381W	TIM11	P81449	96 aa	Predicted RBP	4.2	□□□□□ -1.74
YRA1	YDR381W	CYC7	P00045	113 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	YHR140W	P38842	239 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	GTT1	P40582	234 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	YML108W	Q03759	105 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	POM33	Q12164	279 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	YBR200W-A	Q3E755	54 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	YPR053C	Q6Q5F3	151 aa		4.19	□□□□□ -1.74
YRA1	YDR381W	RPL27A	P0C2H6	136 aa	Known RBP	4.18	□□□□□ -1.74
YRA1	YDR381W	RPL16B	P26785	198 aa	Known RBP	4.18	□□□□□ -1.74
YRA1	YDR381W	PAU7	P39545	55 aa		4.18	□□□□□ -1.74
YRA1	YDR381W	VHS2	P40463	436 aa		4.18	□□□□□ -1.74
YRA1	YDR381W	SDS23	P53172	527 aa		4.18	□□□□□ -1.74
YRA1	YDR381W	YDR366C	P87287	132 aa		4.18	□□□□□ -1.74
YRA1	YDR381W	GPI19	Q04082	140 aa		4.18	□□□□□ -1.74
YRA1	YDR381W	YCR075W-A	Q3E830	75 aa		4.18	□□□□□ -1.74
YRA1	YDR381W	PAU19	P0CE85	124 aa		4.17	□□□□□ -1.74
YRA1	YDR381W	PAU21	P0CE86	164 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms