RNA–Protein interactions for RNA: YDL224C

WHI4, Transcript of Putative RNA binding protein, yeast

Gene WHI4, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI4	YDL224C	LHP1	P33399	275 aa	Known RBP	2.74	□□□□□ -1.97
WHI4	YDL224C	YGL235W	P53071	178 aa		2.74	□□□□□ -1.97
WHI4	YDL224C	VPS28	Q02767	242 aa		2.74	□□□□□ -1.97
WHI4	YDL224C	AIM36	Q03798	255 aa		2.74	□□□□□ -1.97
WHI4	YDL224C	SEN15	Q04675	128 aa		2.74	□□□□□ -1.97
WHI4	YDL224C	YPD1	Q07688	167 aa		2.74	□□□□□ -1.97
WHI4	YDL224C	RPS1B	P23248	255 aa	Known RBP	2.73	□□□□□ -1.97
WHI4	YDL224C	RPS1A	P33442	255 aa	Known RBP	2.73	□□□□□ -1.97
WHI4	YDL224C	SFK1	P35735	353 aa		2.73	□□□□□ -1.97
WHI4	YDL224C	FLX1	P40464	311 aa		2.73	□□□□□ -1.97
WHI4	YDL224C	ZEO1	Q08245	113 aa		2.73	□□□□□ -1.97
WHI4	YDL224C	PCC1	Q3E833	88 aa		2.73	□□□□□ -1.97
WHI4	YDL224C	SRP102	P36057	244 aa	Predicted RBP	2.72	□□□□□ -1.97
WHI4	YDL224C	RIB3	Q99258	208 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	SLH1	P53327	1967 aa	Known RBP	2.72	□□□□□ -1.97
WHI4	YDL224C	HPA3	P39979	161 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	SNN1	P48232	102 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	YGL101W	P53144	215 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	LSM3	P57743	89 aa	Known RBP	2.72	□□□□□ -1.97
WHI4	YDL224C	RUB1	Q03919	77 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	SWC7	Q06707	132 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	SUS1	Q6WNK7	96 aa		2.72	□□□□□ -1.97
WHI4	YDL224C	SPS2	P08459	502 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	YCR023C	P25351	611 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	SRB6	P32570	121 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	RGI1	P40043	161 aa	Predicted RBP	2.71	□□□□□ -1.98
WHI4	YDL224C	YJL218W	P40892	196 aa	Known RBP	2.71	□□□□□ -1.98
WHI4	YDL224C	ERV14	P53173	138 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	HHO1	P53551	258 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	YCL001W-A	P87012	153 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	PIR1	Q03178	341 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	YOR015W	Q12169	119 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	YKL018C-A	Q3E7A7	99 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	YNL146C-A	Q3E7Z1	64 aa		2.71	□□□□□ -1.98
WHI4	YDL224C	PET54	P10834	293 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	SSS1	P35179	80 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	MPC1	P53157	130 aa	Known RBP	2.7	□□□□□ -1.98
WHI4	YDL224C	NQM1	P53228	333 aa	Predicted RBP	2.7	□□□□□ -1.98
WHI4	YDL224C	BUB2	P26448	306 aa	Predicted RBP	2.7	□□□□□ -1.98
WHI4	YDL224C	SUI1	P32911	108 aa	Known RBP	2.7	□□□□□ -1.98
WHI4	YDL224C	YBR013C	P38215	129 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	PRS3	P38689	320 aa	Known RBP	2.7	□□□□□ -1.98
WHI4	YDL224C	YAE1	P47118	141 aa	Predicted RBP	2.7	□□□□□ -1.98
WHI4	YDL224C	MOG1	P47123	218 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	YPR145C-A	Q2V2P0	78 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	YOR381W-A	Q3E804	55 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	MHF2	Q3E829	80 aa		2.7	□□□□□ -1.98
WHI4	YDL224C	MRPL44	P19956	98 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	PAM16	P42949	149 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	PAC10	P48363	199 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	SPC3	Q12133	184 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	FLO1	P32768	1537 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	RPS28B	P0C0X0	67 aa	Known RBP	2.69	□□□□□ -1.98
WHI4	YDL224C	EMP24	P32803	203 aa	Known RBP	2.69	□□□□□ -1.98
WHI4	YDL224C	GLR1	P41921	483 aa	Known RBP	2.69	□□□□□ -1.98
WHI4	YDL224C	RCE1	Q03530	315 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	VMA9	Q3E7B6	73 aa		2.69	□□□□□ -1.98
WHI4	YDL224C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.69	□□□□□ -1.98
WHI4	YDL224C	BNI1	P41832	1953 aa		2.68	□□□□□ -1.98
WHI4	YDL224C	UBI4	P0CG63	381 aa	Known RBP	2.68	□□□□□ -1.98
WHI4	YDL224C	ATG8	P38182	117 aa	RIP-Chip data	2.68	□□□□□ -1.98	not detected
WHI4	YDL224C	MZM1	Q03429	123 aa	Predicted RBP	2.68	□□□□□ -1.98
WHI4	YDL224C	RIM9	Q04734	239 aa		2.68	□□□□□ -1.98
WHI4	YDL224C	YOL131W	Q08270	108 aa		2.68	□□□□□ -1.98
WHI4	YDL224C	HKR1	P41809	1802 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	YRF1-3	P0CX14	1859 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	YRF1-7	P0CX15	1859 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	YRF1-6	P53819	1859 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	RPB7	P34087	171 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	POP7	P38291	140 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	DER1	P38307	211 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	MPM1	P40364	252 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	YGR201C	P42936	225 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	UPS1	Q05776	175 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	ACC1	Q00955	2233 aa	Known RBP	2.67	□□□□□ -1.98
WHI4	YDL224C	RAD6	P06104	172 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	FUN14	P18411	198 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	AIM18	P38884	321 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	UBC7	Q02159	165 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	CWC27	Q02770	301 aa		2.67	□□□□□ -1.98
WHI4	YDL224C	YEL028W	P39989	153 aa		2.66	□□□□□ -1.98
WHI4	YDL224C	VMA21	P41806	77 aa		2.66	□□□□□ -1.98
WHI4	YDL224C	YHP1	Q04116	353 aa		2.66	□□□□□ -1.98
WHI4	YDL224C	SLM6	P38343	150 aa		2.65	□□□□□ -1.98
WHI4	YDL224C	YMR252C	Q04814	134 aa		2.65	□□□□□ -1.98
WHI4	YDL224C	ATG41	Q12048	136 aa		2.65	□□□□□ -1.98
WHI4	YDL224C	YLR046C	Q12253	270 aa		2.65	□□□□□ -1.98
WHI4	YDL224C	PMD1	P32634	1753 aa		2.65	□□□□□ -1.99
WHI4	YDL224C	MRPL15	P36523	253 aa		2.65	□□□□□ -1.99
WHI4	YDL224C	FIG1	P38224	298 aa		2.65	□□□□□ -1.99
WHI4	YDL224C	HTD2	P38790	280 aa	Known RBP	2.65	□□□□□ -1.99
WHI4	YDL224C	SYM1	Q06563	197 aa		2.65	□□□□□ -1.99
WHI4	YDL224C	YIL134C-A	Q45U18	67 aa		2.65	□□□□□ -1.99
WHI4	YDL224C	KIN28	P06242	306 aa		2.64	□□□□□ -1.99
WHI4	YDL224C	GCV3	P39726	170 aa	Predicted RBP	2.64	□□□□□ -1.99
WHI4	YDL224C	RFU1	Q08003	200 aa		2.64	□□□□□ -1.99
WHI4	YDL224C	ECM29	P38737	1868 aa		2.64	□□□□□ -1.99
WHI4	YDL224C	YHL042W	P38729	150 aa		2.63	□□□□□ -1.99
WHI4	YDL224C	UPS3	Q04006	179 aa		2.63	□□□□□ -1.99
WHI4	YDL224C	YLR099W-A	Q3E798	87 aa		2.63	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms