RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	SDO1	Q07953	250 aa	Known RBP	3.07	□□□□□ -1.92
SAF1	YBR280C	AME1	P38313	324 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	ORM2	Q06144	216 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	DGA1	Q08650	418 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	DAD1	Q12248	94 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	YLR342W-A	Q3E810	57 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	YPR053C	Q6Q5F3	151 aa		3.07	□□□□□ -1.92
SAF1	YBR280C	RPS0A	P32905	252 aa	Known RBP	3.06	□□□□□ -1.92
SAF1	YBR280C	MRPS17	Q03246	237 aa	Predicted RBP	3.06	□□□□□ -1.92
SAF1	YBR280C	YLR042C	Q07990	161 aa		3.06	□□□□□ -1.92
SAF1	YBR280C	YCR023C	P25351	611 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	HMX1	P32339	317 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	COX16	P47081	118 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	YDR115W	Q04598	105 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	YOR015W	Q12169	119 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	YAR023C	D6VPM8	179 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	YBR292C	P38357	123 aa		3.05	□□□□□ -1.92
SAF1	YBR280C	ERI1	P62651	68 aa	Known RBP	3.05	□□□□□ -1.92
SAF1	YBR280C	UTP23	Q12339	254 aa	Known RBP	3.05	□□□□□ -1.92
SAF1	YBR280C	SUR2	P38992	349 aa		3.04	□□□□□ -1.92
SAF1	YBR280C	LOC1	P43586	204 aa	Predicted RBP	3.04	□□□□□ -1.92
SAF1	YBR280C	TAD2	P47058	250 aa		3.04	□□□□□ -1.92
SAF1	YBR280C	DIA1	P54005	336 aa		3.04	□□□□□ -1.92
SAF1	YBR280C	TIM22	Q12328	207 aa		3.04	□□□□□ -1.92
SAF1	YBR280C	YPR010C-A	A5Z2X5	72 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	UBI4	P0CG63	381 aa	Known RBP	3.03	□□□□□ -1.92
SAF1	YBR280C	MAG1	P22134	296 aa	Known RBP	3.03	□□□□□ -1.92
SAF1	YBR280C	YPT10	P38146	199 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	YGR017W	P53210	297 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	BET5	Q03630	159 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	ANT1	Q06497	328 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	YBR013C	P38215	129 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	YIL163C	P40448	117 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	YGL185C	P53100	379 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	YCL001W-A	P87012	153 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	LCL1	Q02786	101 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	ADD37	Q03233	198 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	YMR320W	Q04897	101 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	SME1	Q12330	94 aa	Predicted RBP	3.03	□□□□□ -1.92
SAF1	YBR280C	PCC1	Q3E833	88 aa		3.03	□□□□□ -1.92
SAF1	YBR280C	RPL12A	P0CX53	165 aa	Known RBP	3.02	□□□□□ -1.93
SAF1	YBR280C	RPL12B	P0CX54	165 aa		3.02	□□□□□ -1.93
SAF1	YBR280C	SAR1	P20606	190 aa	Known RBP	3.02	□□□□□ -1.93
SAF1	YBR280C	TEM1	P38987	245 aa		3.02	□□□□□ -1.93
SAF1	YBR280C	SMD3	P43321	101 aa	Known RBP	3.02	□□□□□ -1.93
SAF1	YBR280C	TIM21	P53220	239 aa		3.02	□□□□□ -1.93
SAF1	YBR280C	UPS3	Q04006	179 aa		3.02	□□□□□ -1.93
SAF1	YBR280C	YLR307C-A	Q3E825	87 aa		3.02	□□□□□ -1.93
SAF1	YBR280C	YMR122W-A	Q3E842	84 aa		3.02	□□□□□ -1.93
SAF1	YBR280C	RPL14A	P36105	138 aa	Known RBP	3.01	□□□□□ -1.93
SAF1	YBR280C	RPL14B	P38754	138 aa	Known RBP	3.01	□□□□□ -1.93
SAF1	YBR280C	SRB7	P47822	140 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	PMP3	P87284	55 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	UBC5	P15732	148 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	SEC59	P20048	519 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	POF1	P25576	258 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	MIX23	P38162	196 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	YFR045W	P43617	309 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	YGL194C-A	Q2V2P6	80 aa		3.01	□□□□□ -1.93
SAF1	YBR280C	FZF1	P32805	299 aa		3	□□□□□ -1.93
SAF1	YBR280C	GCV3	P39726	170 aa	Predicted RBP	3	□□□□□ -1.93
SAF1	YBR280C	PGD1	P40356	397 aa		3	□□□□□ -1.93
SAF1	YBR280C	YIL059C	P40520	121 aa		3	□□□□□ -1.93
SAF1	YBR280C	MMS2	P53152	137 aa		3	□□□□□ -1.93
SAF1	YBR280C	PAU4	P53427	120 aa		3	□□□□□ -1.93
SAF1	YBR280C	DXO1	Q06349	442 aa		3	□□□□□ -1.93
SAF1	YBR280C	YDR029W	Q12111	104 aa		3	□□□□□ -1.93
SAF1	YBR280C	TY1A-DR3	Q12441	440 aa		3	□□□□□ -1.93
SAF1	YBR280C	YBR090C	P38253	122 aa		2.99	□□□□□ -1.93
SAF1	YBR280C	ARC15	P40518	154 aa	RIP-Chip data	2.99	□□□□□ -1.93	not detected
SAF1	YBR280C	YGR026W	P53217	278 aa		2.99	□□□□□ -1.93
SAF1	YBR280C	YOR105W	Q08504	108 aa		2.99	□□□□□ -1.93
SAF1	YBR280C	RPL16A	P26784	199 aa	Known RBP	2.99	□□□□□ -1.93
SAF1	YBR280C	CYB5	P40312	120 aa		2.99	□□□□□ -1.93
SAF1	YBR280C	DDR48	P18899	430 aa	Known RBP	2.98	□□□□□ -1.93
SAF1	YBR280C	ATP19	P81451	68 aa		2.98	□□□□□ -1.93
SAF1	YBR280C	ATG33	Q06485	197 aa		2.98	□□□□□ -1.93
SAF1	YBR280C	RPS22A	P0C0W1	130 aa	Known RBP	2.97	□□□□□ -1.93
SAF1	YBR280C	PAU1	P0CE88	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU14	P0CE89	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU6	P0CE90	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU18	P0CE91	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU8	P0CE92	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU11	P0CE93	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	SOH1	P38633	127 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU13	P38725	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU10	Q03050	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU20	Q08322	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	PAU9	Q3E770	120 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	FRS1	P15624	595 aa	Known RBP	2.97	□□□□□ -1.93
SAF1	YBR280C	SPC25	P40014	221 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	ERG28	P40030	148 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	JAC1	P53193	184 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	SNA2	P56508	79 aa		2.97	□□□□□ -1.93
SAF1	YBR280C	YHR140W	P38842	239 aa		2.96	□□□□□ -1.94
SAF1	YBR280C	CSM4	Q08955	156 aa		2.96	□□□□□ -1.94
SAF1	YBR280C	SNU23	Q12368	194 aa	Predicted RBP	2.96	□□□□□ -1.94
SAF1	YBR280C	YDR010C	Q12426	110 aa		2.96	□□□□□ -1.94
SAF1	YBR280C	COX19	Q3E731	98 aa		2.96	□□□□□ -1.94
SAF1	YBR280C	TVP18	Q04767	167 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms