RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 S1PR5Q9H228 398 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 UBE2TQ9NPD8 197 aaPredicted RBP18.32■□□□□ 0.52
CLN6-218ENST00000637223 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 YIPF1Q9Y548 306 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 INSL5Q9Y5Q6 135 aa18.32■□□□□ 0.52
CLN6-218ENST00000637223 KLK7P49862 253 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 YWHAEP62258 255 aaKnown RBP18.31■□□□□ 0.52
CLN6-218ENST00000637223 GCNT1Q02742 428 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 UBXN1Q04323 297 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 TWF1Q12792 350 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 MAPRE1Q15691 268 aaKnown RBP18.31■□□□□ 0.52
CLN6-218ENST00000637223 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 MGAT5BQ3V5L5 792 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 UBR7Q8N806 425 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 SMRP1Q8NCR6 262 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 SPPL2BQ8TCT7 592 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 C2orf15Q8WU43 125 aaKnown RBP18.31■□□□□ 0.52
CLN6-218ENST00000637223 ZNF707Q96C28 371 aaPredicted RBP18.31■□□□□ 0.52
CLN6-218ENST00000637223 PCED1BQ96HM7 432 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 SIX2Q9NPC8 291 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 ZDHHC7Q9NXF8 308 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 APEX2Q9UBZ4 518 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 PCDHB4Q9Y5E5 795 aa18.31■□□□□ 0.52
CLN6-218ENST00000637223 GRXCR2A6NFK2 248 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 CLDN5O00501 218 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 SERPINC1P01008 464 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 LRG1P02750 347 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 ACO1P21399 889 aaKnown RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 CYP2F1P24903 491 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 SMAD4Q13485 552 aaKnown RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 PTCRAQ6ISU1 281 aaPredicted RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 C4orf50Q6ZRC1 276 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 CRYBG2Q8N1P7 616 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 C12orf29Q8N999 325 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 CMASQ8NFW8 434 aaPredicted RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 SMG7Q92540 1137 aaKnown RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 MED10Q9BTT4 135 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 B3GNT5Q9BYG0 378 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 PRKD2Q9BZL6 878 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 ADAM7Q9H2U9 754 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
CLN6-218ENST00000637223 AJAP1Q9UKB5 411 aaPredicted RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 USP15Q9Y4E8 981 aaPredicted RBP18.3■□□□□ 0.52
CLN6-218ENST00000637223 MBTPS2O43462 519 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 HNRNPA1P09651 372 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLN6-218ENST00000637223 HAPLN1P10915 354 aaPredicted RBP18.29■□□□□ 0.52
CLN6-218ENST00000637223 CCDC130P13994 396 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 BDNFP23560 247 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 HOXA9P31269 272 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 ALDH1A3P47895 512 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 TUFMP49411 452 aaKnown RBP18.29■□□□□ 0.52
CLN6-218ENST00000637223 GPR15P49685 360 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 RAD23BP54727 409 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 MFAP3P55082 362 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 ITIH3Q06033 890 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 SYCP1Q15431 976 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 CES5AQ6NT32 575 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 DPY19L2P1Q6NXN4 242 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 GPR149Q86SP6 731 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 SLC4A11Q8NBS3 891 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 TMEM176AQ96HP8 235 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
CLN6-218ENST00000637223 ZNF518BQ9C0D4 1074 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 KCNH6Q9H252 994 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 FAM124BQ9H5Z6 455 aaPredicted RBP18.29■□□□□ 0.52
CLN6-218ENST00000637223 PIDD1Q9HB75 910 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 ABCB6Q9NP58 842 aa18.29■□□□□ 0.52
CLN6-218ENST00000637223 TEX33O43247 280 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 DCXO43602 365 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 XYLBO75191 536 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 TRIM21P19474 475 aaKnown RBP18.28■□□□□ 0.52
CLN6-218ENST00000637223 FANCCQ00597 558 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 PTPN21Q16825 1174 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 FILIP1LQ4L180 1135 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 KLHDC7AQ5VTJ3 777 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 SDHAF4Q5VUM1 108 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 IQCEQ6IPM2 695 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 RTL10Q7L3V2 364 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 ENOSF1Q7L5Y1 443 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 SCN4BQ8IWT1 228 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 SLC2A14Q8TDB8 520 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 FUBP3Q96I24 572 aaKnown RBP eCLIP18.28■□□□□ 0.52
CLN6-218ENST00000637223 HEXIM2Q96MH2 286 aaKnown RBP18.28■□□□□ 0.52
CLN6-218ENST00000637223 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
CLN6-218ENST00000637223 DNAI2Q9GZS0 605 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
CLN6-218ENST00000637223 HSFX1Q9UBD0 423 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 DNAJC12Q9UKB3 198 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 SIK3Q9Y2K2 1263 aa18.28■□□□□ 0.52
CLN6-218ENST00000637223 RNF225M0QZC1 329 aaPredicted RBP18.27■□□□□ 0.52
CLN6-218ENST00000637223 KRT5P13647 590 aa18.27■□□□□ 0.52
CLN6-218ENST00000637223 ATF6P18850 670 aa18.27■□□□□ 0.52
CLN6-218ENST00000637223 ADORA2BP29275 332 aa18.27■□□□□ 0.52
CLN6-218ENST00000637223 CACNA2D1P54289 1103 aa18.27■□□□□ 0.52
CLN6-218ENST00000637223 PLD1Q13393 1074 aa18.27■□□□□ 0.52
CLN6-218ENST00000637223 DDR2Q16832 855 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms