RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 LIG4P49917 911 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 PAPOLAP51003 745 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 KRT17Q04695 432 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 STK4Q13043 487 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 TJAP1Q5JTD0 557 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 RTP2Q5QGT7 225 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 PDXDC1Q6P996 788 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 CYB5D1Q6P9G0 228 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 MICALCLQ6ZW33 695 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 ARHGAP22Q7Z5H3 698 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 VPS52Q8N1B4 723 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 FAM76AQ8TAV0 307 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 HPS3Q969F9 1004 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 C18orf25Q96B23 403 aaPredicted RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 CAPS2Q9BXY5 557 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 OXCT2Q9BYC2 517 aaPredicted RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 AVENQ9NQS1 362 aaPredicted RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 DZANK1Q9NVP4 752 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 PUF60Q9UHX1 559 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 AGO2Q9UKV8 859 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 HPCAL4Q9UM19 191 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 HNRNPDLO14979 420 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 MGRN1O60291 552 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 ABLIM3O94929 683 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 OAZ2O95190 189 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 RPN1P04843 607 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 TPP2P29144 1249 aaPredicted RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 HOXA9P31269 272 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 SKOR1P84550 965 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 C1orf220Q5T0J3 134 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 CCDC170Q8IYT3 715 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 FUKQ8N0W3 1084 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 CBWD1Q9BRT8 395 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 IQCGQ9H095 443 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 VRTNQ9H8Y1 702 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 LIMA1Q9UHB6 759 aaKnown RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 FBXW11Q9UKB1 542 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.22□□□□□ -0.93
GTF2I-219ENST00000621040 GDAQ9Y2T3 454 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 MYH10P35580 1976 aa9.22□□□□□ -0.93
GTF2I-219ENST00000621040 TRIM49BA6NDI0 452 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 A6NHS1 94 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 PDXKO00764 312 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 LDHAP00338 332 aaKnown RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 GLUD2P49448 558 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 ZBED6P86452 979 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 ELAVL2Q12926 359 aaKnown RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 PSMD6Q15008 389 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 HERC4Q5GLZ8 1057 aaPredicted RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 JADE1Q6IE81 842 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 KANK3Q6NY19 840 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 CEP57Q86XR8 500 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 TRIM42Q8IWZ5 723 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 TRIM58Q8NG06 486 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 PLEKHO2Q8TD55 490 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 CCDC47Q96A33 483 aaKnown RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 CLSTN3Q9BQT9 956 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 MSTO1Q9BUK6 570 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 ACTR5Q9H9F9 607 aaPredicted RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 ABHD10Q9NUJ1 306 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 HSFX1Q9UBD0 423 aa9.21□□□□□ -0.93
GTF2I-219ENST00000621040 TPX2Q9ULW0 747 aaKnown RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 UBQLN1Q9UMX0 589 aaKnown RBP9.21□□□□□ -0.93
GTF2I-219ENST00000621040 NT5C1B-RDH14C9J2C7 533 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 PODXLO00592 558 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 RNF8O76064 485 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 NFICP08651 508 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 CNPP09543 421 aaKnown RBP9.21□□□□□ -0.94
GTF2I-219ENST00000621040 TYMPP19971 482 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 CDR1P51861 262 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 KNOP1Q1ED39 458 aaKnown RBP9.21□□□□□ -0.94
GTF2I-219ENST00000621040 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 RSPO2Q6UXX9 243 aaPredicted RBP9.21□□□□□ -0.94
GTF2I-219ENST00000621040 ZBTB33Q86T24 672 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 TAX1BP1Q86VP1 789 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 SDR16C5Q8N3Y7 309 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 GUF1Q8N442 669 aaKnown RBP9.21□□□□□ -0.94
GTF2I-219ENST00000621040 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.94
GTF2I-219ENST00000621040 RTP3Q9BQQ7 232 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 KIAA1586Q9HCI6 787 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 GDAP2Q9NXN4 497 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 SIX4Q9UIU6 781 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 CTNND2Q9UQB3 1225 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 INPP5FQ9Y2H2 1132 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 ITIH6Q6UXX5 1313 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 ARHGEF37A1IGU5 675 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 GCNT3O95395 438 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 HOXB8P17481 243 aaPredicted RBP9.21□□□□□ -0.94
GTF2I-219ENST00000621040 RAB33AQ14088 237 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 USP41Q3LFD5 358 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 PPFIBP1Q86W92 1011 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 GPD1LQ8N335 351 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 TMEM130Q8N3G9 435 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 CASP10Q92851 521 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 TMEM169Q96HH4 297 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 GSDMAQ96QA5 445 aa9.21□□□□□ -0.94
GTF2I-219ENST00000621040 CACNG4Q9UBN1 327 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms