RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 TOPORSQ9NS56 1045 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-220ENST00000608858 GJB4Q9NTQ9 266 aa10.08□□□□□ -0.8
CTCFL-220ENST00000608858 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
CTCFL-220ENST00000608858 PCDHA12Q9UN75 941 aa10.08□□□□□ -0.8
CTCFL-220ENST00000608858 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 TLX3O43711 291 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 TXKP42681 527 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 TUFMP49411 452 aaKnown RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 GPR15P49685 360 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 NLRP12P59046 1061 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 SRSF1Q07955 248 aaKnown RBP eCLIP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 NR1H3Q13133 447 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 SLC14A1Q13336 389 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 EML3Q32P44 896 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 ZNF568Q3ZCX4 644 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 ZC2HC1CQ53FD0 456 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 TAF1BQ53T94 588 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 EARS2Q5JPH6 523 aaKnown RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 PEAR1Q5VY43 1037 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 PIK3AP1Q6ZUJ8 805 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 NEK8Q86SG6 692 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 IL17RCQ8NAC3 791 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 ATP2A3Q93084 1043 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 HSPA12BQ96MM6 686 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 ACO2Q99798 780 aaKnown RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 ESYT1Q9BSJ8 1104 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 KIAA1522Q9P206 1035 aaPredicted RBP10.07□□□□□ -0.8
CTCFL-220ENST00000608858 DKK4Q9UBT3 224 aa10.07□□□□□ -0.8
CTCFL-220ENST00000608858 USP9XQ93008 2570 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 M0QZQ0 153 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 PPEF2O14830 753 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 ADAM23O75077 832 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 LYPLA2O95372 231 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 KCNE1P15382 129 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 IFNAR1P17181 557 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 MRPS21P82921 87 aaKnown RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 BYSLQ13895 437 aaKnown RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 SLC10A6Q3KNW5 377 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 SPDYCQ5MJ68 293 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 RNF20Q5VTR2 975 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 LMBRD2Q68DH5 695 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 LRRTM3Q86VH5 581 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 MON1AQ86VX9 555 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 SLFN12Q8IYM2 578 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 ARL14EPQ8N8R7 260 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 OR10T2Q8NGX3 314 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 MRPS31Q92665 395 aaKnown RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 SEMA4CQ9C0C4 833 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 TTC12Q9H892 705 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 CYP8B1Q9UNU6 501 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTCFL-220ENST00000608858 TNFSF13BQ9Y275 285 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 AK5Q9Y6K8 562 aa10.06□□□□□ -0.8
CTCFL-220ENST00000608858 PCDH15Q96QU1 1955 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 KCNK3O14649 394 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 SPATA31C1P0DKV0 1188 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 HMGA1P17096 107 aaKnown RBP10.05□□□□□ -0.8
CTCFL-220ENST00000608858 PDIA3P30101 505 aaKnown RBP10.05□□□□□ -0.8
CTCFL-220ENST00000608858 DPP6P42658 865 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 NAMPTP43490 491 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 CXADRP78310 365 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 GRIK2Q13002 908 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 LY6DQ14210 128 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 DHRS13Q6UX07 377 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 GPR155Q7Z3F1 870 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 APBB1IPQ7Z5R6 666 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-220ENST00000608858 CATSPER3Q86XQ3 398 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 MCPH1Q8NEM0 835 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 SH3RF2Q8TEC5 729 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 KIF2CQ99661 725 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 MIR1-1HGQ9H1L0 117 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 GAREM1Q9H706 876 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 CD93Q9NPY3 652 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-220ENST00000608858 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 BTBD3Q9Y2F9 522 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 MGAQ8IWI9 3026 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 SPTA1P02549 2419 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 COL12A1Q99715 3063 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
CTCFL-220ENST00000608858 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 MYMKA6NI61 221 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 BTBD18B2RXH4 712 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 MED24O75448 989 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 WISP1O95388 367 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 CKMP06732 381 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 XRCC6P12956 609 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTCFL-220ENST00000608858 HLA-EP13747 358 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 GABRG2P18507 467 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 CYP11B2P19099 503 aa10.04□□□□□ -0.8
CTCFL-220ENST00000608858 HOXD12P35452 270 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms