RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ARMCX6Q7L4S7 300 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 PIP4P1Q86T03 277 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 C11orf74Q86VG3 221 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 SFTPA1Q8IWL2 248 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 CCDC33Q8N5R6 958 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 OLIG1Q8TAK6 271 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 C2orf15Q8WU43 125 aaKnown RBP17.3■□□□□ 0.36
SSBP4-211ENST00000601614 MRPS31Q92665 395 aaKnown RBP17.3■□□□□ 0.36
SSBP4-211ENST00000601614 BICD1Q96G01 975 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 FNBP1Q96RU3 617 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
SSBP4-211ENST00000601614 TIPINQ9BVW5 301 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 LINC00597Q9H2U6 94 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 FSCN3Q9NQT6 498 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 FREM2Q5SZK8 3169 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
SSBP4-211ENST00000601614 ENGP17813 658 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 PTGER3P43115 390 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 SMTNP53814 917 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 SIM1P81133 766 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-211ENST00000601614 ZC2HC1CQ53FD0 456 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-211ENST00000601614 KRT79Q5XKE5 535 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 C8orf76Q96K31 380 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 PNMA5Q96PV4 448 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 PI4K2AQ9BTU6 479 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 CPSF3Q9UKF6 684 aaKnown RBP17.29■□□□□ 0.36
SSBP4-211ENST00000601614 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
SSBP4-211ENST00000601614 GCN1Q92616 2671 aaKnown RBP17.28■□□□□ 0.36
SSBP4-211ENST00000601614 LOC400499M0QZD8 3231 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 IFNAR2P48551 515 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 LIG4P49917 911 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 MESP2Q0VG99 397 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 SEMA3BQ13214 749 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 TMEM132DQ14C87 1099 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 CRY1Q16526 586 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 CCDC142Q17RM4 750 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 SOWAHCQ53LP3 525 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-211ENST00000601614 PROSER1Q86XN7 944 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 EFCAB13Q8IY85 973 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 TMEFF1Q8IYR6 380 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 CHCHD4Q8N4Q1 142 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 SYT2Q8N9I0 419 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-211ENST00000601614 KCNN1Q92952 543 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 ATP2A3Q93084 1043 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 TSPAN18Q96SJ8 248 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 TRPC7Q9HCX4 862 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 MBD1Q9UIS9 605 aaPredicted RBP17.28■□□□□ 0.36
SSBP4-211ENST00000601614 DSEQ9UL01 958 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 MMP17Q9ULZ9 603 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 PCDHB5Q9Y5E4 795 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 SMG1Q96Q15 3661 aaKnown RBP17.28■□□□□ 0.36
SSBP4-211ENST00000601614 IGSF10Q6WRI0 2623 aa17.28■□□□□ 0.36
SSBP4-211ENST00000601614 A0A0B4J269 797 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 HNRNPDLO14979 420 aaKnown RBP17.27■□□□□ 0.36
SSBP4-211ENST00000601614 PRPF40AO75400 957 aaKnown RBP17.27■□□□□ 0.36
SSBP4-211ENST00000601614 PIGRP01833 764 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 CSH1P0DML2 217 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 CSH2P0DML3 217 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 PAX3P23760 479 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 P2RY2P41231 377 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 TRAPPC10P48553 1259 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 TAF6P49848 677 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 SLC12A3P55017 1021 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 ZXDBP98169 803 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 SMARCB1Q12824 385 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 LMAN2Q12907 356 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 ZRSR1Q15695 479 aaKnown RBP17.27■□□□□ 0.36
SSBP4-211ENST00000601614 DDR2Q16832 855 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 ARSHQ5FYA8 562 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 C19orf48Q6RUI8 117 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 TTC30AQ86WT1 665 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 METTL23Q86XA0 190 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 THEM5Q8N1Q8 247 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.36
SSBP4-211ENST00000601614 LRRC15Q8TF66 581 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 EXOC4Q96A65 974 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 PLIN2Q99541 437 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 CCSER1Q9C0I3 900 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 SLC32A1Q9H598 525 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 GCNT4Q9P109 453 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 GPSM3Q9Y4H4 160 aa17.27■□□□□ 0.36
SSBP4-211ENST00000601614 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 C2orf78A6NCI8 922 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 TNFRSF10BO14763 440 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 NOL4O94818 638 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 CYP2F1P24903 491 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 ACOT2P49753 483 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 ANAPC15P60006 121 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 KYAT1Q16773 422 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 HYIQ5T013 277 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 SYT12Q8IV01 421 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 FBXO18Q8NFZ0 1043 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 SH3RF2Q8TEC5 729 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 MYRFLQ96LU7 910 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 MSTO1Q9BUK6 570 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 NUSAP1Q9BXS6 441 aaKnown RBP17.26■□□□□ 0.35
SSBP4-211ENST00000601614 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
SSBP4-211ENST00000601614 TMEM206Q9H813 350 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms