RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CHST7Q9NS84 486 aa18■□□□□ 0.47
SHKBP1-216ENST00000598201 UBQLN1Q9UMX0 589 aaKnown RBP18■□□□□ 0.47
SHKBP1-216ENST00000598201 CDY2AQ9Y6F7 541 aa18■□□□□ 0.47
SHKBP1-216ENST00000598201 SIGLEC16A6NMB1 481 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 ADAMTS4O75173 837 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 MYCNP04198 464 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 KRT3P12035 628 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 CCDC105Q8IYK2 499 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 IQCKQ8N0W5 287 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 RNF25Q96BH1 459 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 ZIM3Q96PE6 472 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 FAM124BQ9H5Z6 455 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 GOLGA2P5Q9HBQ8 144 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 TSPAN16Q9UKR8 245 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 R3HDM2Q9Y2K5 976 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 SNX24Q9Y343 169 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 PI4K2BG5E9Z4 385 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 PIRO00625 290 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 SPTLC1O15269 473 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 HCRTO43612 131 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 RNF40O75150 1001 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 PFKMP08237 780 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 KCNE1P15382 129 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 KLF1Q13351 362 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 SNX1Q13596 522 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 PIGHQ14442 188 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 SOWAHAQ2M3V2 549 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 ALS2CLQ60I27 953 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 TWF2Q6IBS0 349 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 LCLAT1Q6UWP7 414 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 ACOT1Q86TX2 421 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 SESTD1Q86VW0 696 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 TTC39CQ8N584 583 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 ARFGAP1Q8N6T3 406 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 EMC1Q8N766 993 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 NIPA2Q8N8Q9 360 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 EXD1Q8NHP7 514 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 LPIN3Q9BQK8 851 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 SYNCQ9H7C4 482 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 ZDHHC18Q9NUE0 388 aa17.99■□□□□ 0.47
SHKBP1-216ENST00000598201 CTSHP09668 335 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 GABRB2P47870 512 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 GJA8P48165 433 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 FNTAP49354 379 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 GSCP56915 257 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 NKX3-2P78367 333 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 RNF180Q86T96 592 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 ACSF2Q96CM8 615 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 OSBPL8Q9BZF1 889 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 RASAL2Q9UJF2 1139 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 OGDHLQ9ULD0 1010 aa17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 PDCD11Q14690 1871 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-216ENST00000598201 PIK3R2O00459 728 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 HSF2BPO75031 334 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 CHRNA1P02708 482 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 RPL21P46778 160 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 ADCY2Q08462 1091 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 ZNF268Q14587 947 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 GOLGA7BQ2TAP0 167 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 PPP1R26Q5T8A7 1209 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 ZDHHC24Q6UX98 284 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 KLHDC9Q8NEP7 349 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 MCRS1Q96EZ8 462 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 SH3GL2Q99962 352 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 OSBPL7Q9BZF2 842 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 CRISPLD2Q9H0B8 497 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 KIAA1257Q9ULG3 409 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 TRPV2Q9Y5S1 764 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 MEIS3P2A8K0S8 358 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 PSMA2P25787 234 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 DRG2P55039 364 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 UAP1Q16222 522 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 FBXO47Q5MNV8 452 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 CFAP58Q5T655 872 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 LRRC38Q5VT99 294 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 SERINC5Q86VE9 423 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 FAM118BQ9BPY3 351 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 DCLK3Q9C098 648 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 DPEP3Q9H4B8 488 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 FAM49BQ9NUQ9 324 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 WDR35Q9P2L0 1181 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 ST3GAL5Q9UNP4 418 aa17.97■□□□□ 0.47
SHKBP1-216ENST00000598201 TULP2O00295 520 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 PODXLO00592 558 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 CD4P01730 458 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 KRT1P04264 644 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 ASGR1P07306 291 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 FGFR1P11362 822 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 ZNF618Q5T7W0 954 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 TTC30AQ86WT1 665 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 TNS4Q8IZW8 715 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 OR6B3Q8NGW1 331 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 KBTBD7Q8WVZ9 684 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 ZFP42Q96MM3 310 aa17.96■□□□□ 0.47
SHKBP1-216ENST00000598201 SLITRK1Q96PX8 696 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms