RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MED10Q9BTT4 135 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 APOL5Q9BWW9 433 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 B3GNT5Q9BYG0 378 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 PRDM6Q9NQX0 595 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 FAM49BQ9NUQ9 324 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 IFNKQ9P0W0 207 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 YIPF1Q9Y548 306 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 FHOD1Q9Y613 1164 aa20.36■□□□□ 0.85
DDX39A-214ENST00000590556 ATP8B3O60423 1300 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 NOL4O94818 638 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 LRG1P02750 347 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 UCHL3P15374 230 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 BDNFP23560 247 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 CYP2F1P24903 491 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 HOXA9P31269 272 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 ALDH1A3P47895 512 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 RAPGEF1Q13905 1077 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 CFAP221Q4G0U5 840 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 TMC5Q6UXY8 1006 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 RBBP8NLQ8NC74 664 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-214ENST00000590556 CMASQ8NFW8 434 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-214ENST00000590556 RHOBTB2Q9BYZ6 727 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 PRKD2Q9BZL6 878 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 GANQ9H2C0 597 aa20.35■□□□□ 0.85
DDX39A-214ENST00000590556 AJAP1Q9UKB5 411 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-214ENST00000590556 A0A1W2PQC6 194 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 CLDN5O00501 218 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 CCL16O15467 120 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 XYLBO75191 536 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 SOAT2O75908 522 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 PAEPP09466 180 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 CCDC130P13994 396 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 CD19P15391 556 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 USP8P40818 1118 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 MAGEA11P43364 429 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 ITIH3Q06033 890 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 TWF1Q12792 350 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 PLD1Q13393 1074 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 PTPN21Q16825 1174 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 CES5AQ6NT32 575 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 VSTM1Q6UX27 236 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 SCN4BQ8IWT1 228 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 SLC2A14Q8TDB8 520 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 SHC3Q92529 594 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 NAA15Q9BXJ9 866 aaKnown RBP20.34■□□□□ 0.85
DDX39A-214ENST00000590556 ZNF518BQ9C0D4 1074 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 S1PR5Q9H228 398 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 ADAM7Q9H2U9 754 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 KIAA1257Q9ULG3 409 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 CNTN6Q9UQ52 1028 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 DAAM1Q9Y4D1 1078 aa20.34■□□□□ 0.85
DDX39A-214ENST00000590556 RNF225M0QZC1 329 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 CBFA2T2O43439 604 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 TPM3P06753 285 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 ADORA2BP29275 332 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 ZNF132P52740 706 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 EPHB3P54753 998 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 POLR2FP61218 127 aaKnown RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 RPL10AP62906 217 aaKnown RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 DRAP1Q14919 205 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 SMYD5Q6GMV2 418 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 CYP26C1Q6V0L0 522 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 FAM35AQ86V20 835 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 FUKQ8N0W3 1084 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 SMRP1Q8NCR6 262 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 SMG7Q92540 1137 aaKnown RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 ZNF707Q96C28 371 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 CYFIP2Q96F07 1278 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 HNRNPABQ99729 332 aaKnown RBP20.33■□□□□ 0.85
DDX39A-214ENST00000590556 STK33Q9BYT3 514 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 PIDD1Q9HB75 910 aa20.33■□□□□ 0.85
DDX39A-214ENST00000590556 PTPRDP23468 1912 aa20.33■□□□□ 0.84
DDX39A-214ENST00000590556 FOXN3O00409 490 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-214ENST00000590556 EPHB6O15197 1021 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 PAPLNO95428 1278 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 POU2F2P09086 479 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 VDRP11473 427 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 GRIK1P39086 918 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 PLCB2Q00722 1185 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 DDR2Q16832 855 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 LEXMQ3ZCV2 418 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 SGO2Q562F6 1265 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 PPP1R26Q5T8A7 1209 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-214ENST00000590556 ARHGAP17Q68EM7 881 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 PAQR9Q6ZVX9 377 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 GPR149Q86SP6 731 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 ELMOD1Q8N336 334 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 XPO4Q9C0E2 1151 aaKnown RBP20.32■□□□□ 0.84
DDX39A-214ENST00000590556 NLRC4Q9NPP4 1024 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 THEGQ9P2T0 379 aa20.32■□□□□ 0.84
DDX39A-214ENST00000590556 AP1G2O75843 785 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 GPR15P49685 360 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 TFF2Q03403 129 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 SMAD4Q13485 552 aaKnown RBP20.31■□□□□ 0.84
DDX39A-214ENST00000590556 VEPH1Q14D04 833 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 ATAT1Q5SQI0 421 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 FEZF2Q8TBJ5 459 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 SMARCD1Q96GM5 515 aa20.31■□□□□ 0.84
DDX39A-214ENST00000590556 ZNF512Q96ME7 567 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-214ENST00000590556 RIPOR3Q96MK2 946 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms