RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 LNP1A1A4G5 178 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 BCLAF3A2AJT9 711 aaKnown RBP14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 CSH1P0DML2 217 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 CSH2P0DML3 217 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 KCNA4P22459 653 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 ACAT1P24752 427 aaKnown RBP14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 CYP2F1P24903 491 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 FAM160A1Q05DH4 1040 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 BFSP1Q12934 665 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 DMC1Q14565 340 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 SV2CQ496J9 727 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 FBXO43Q4G163 708 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 INTS6LQ5JSJ4 861 aaKnown RBP14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 ZNF720Q7Z2F6 126 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 LIMS2Q7Z4I7 341 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 METTL23Q86XA0 190 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 SFR1Q86XK3 245 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 DCP1BQ8IZD4 617 aaKnown RBP14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 THEM5Q8N1Q8 247 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 OSCP1Q8WVF1 389 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 LARP4BQ92615 738 aaKnown RBP14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 TMEM206Q9H813 350 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 SIX4Q9UIU6 781 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 WNT6Q9Y6F9 365 aa14.85□□□□□ -0.03
CLPTM1-208ENST00000588274 FAM208BQ5VWN6 2430 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 ZNF638Q14966 1978 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 C2orf78A6NCI8 922 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 GABRDO14764 452 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 GIPC1O14908 333 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 TBCAO75347 108 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 PRPF40AO75400 957 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 TCF3P15923 654 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 POLR2BP30876 1174 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 CASP5P51878 434 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 CFAP221Q4G0U5 840 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 SLFN12LQ6IEE8 588 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 RASSF3Q86WH2 238 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 NT5DC4Q86YG4 428 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 BRSK2Q8IWQ3 736 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 MRPS31Q92665 395 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 HVCN1Q96D96 273 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 ZNF560Q96MR9 790 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 ACBD6Q9BR61 282 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 EDEM2Q9BV94 578 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 FGFBP2Q9BYJ0 223 aa14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 MAGED2Q9UNF1 606 aaPredicted RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 TNRC6BQ9UPQ9 1833 aaKnown RBP14.84□□□□□ -0.03
CLPTM1-208ENST00000588274 DMXL2Q8TDJ6 3036 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 IL18RAPO95256 599 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 APBB3O95704 486 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 ITGB3P05106 788 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 HNRNPLP14866 589 aaKnown RBP eCLIP14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 BCKDHBP21953 392 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 GJB2P29033 226 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 ABCD1P33897 745 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 LONP1P36776 959 aaKnown RBP14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 OPRD1P41143 372 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 UBA7P41226 1012 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 PNPLA4P41247 253 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 MESP2Q0VG99 397 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 NFE2Q16621 373 aaPredicted RBP14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 PMS2CLQ68D20 193 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 RNF43Q68DV7 783 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 PSAPL1Q6NUJ1 521 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 CPA6Q8N4T0 437 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 LRRC52Q8N7C0 313 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 KBTBD7Q8WVZ9 684 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 CD101Q93033 1021 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 DNAJC19Q96DA6 116 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 SAAL1Q96ER3 474 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 CALML4Q96GE6 196 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 TMX3Q96JJ7 454 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 CHAMP1Q96JM3 812 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 ZHX3Q9H4I2 956 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 GDAP2Q9NXN4 497 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 GTF3C4Q9UKN8 822 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 PTPRJQ12913 1337 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 NUP205Q92621 2012 aa14.83□□□□□ -0.04
CLPTM1-208ENST00000588274 C1QTNF9BB2RNN3 333 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 K7EQS6 105 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 CDX4O14627 284 aaPredicted RBP14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 PROS1P07225 676 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 C1QTNF9P0C862 333 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 TSPY1Q01534 308 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 TAF12Q16514 161 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 SOWAHAQ2M3V2 549 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 FAM171BQ6P995 826 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 SFTPA1Q8IWL2 248 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 USP33Q8TEY7 942 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 POMGNT1Q8WZA1 660 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 ATP2A3Q93084 1043 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 ACDQ96AP0 544 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 FAM213AQ9BRX8 229 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 LINC00597Q9H2U6 94 aa14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 DUS2Q9NX74 493 aaKnown RBP14.82□□□□□ -0.04
CLPTM1-208ENST00000588274 ARHGAP26Q9UNA1 814 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms