RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ALDH6A1Q02252 535 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PTGISQ16647 500 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 USP49Q70CQ1 688 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 LUZP2Q86TE4 346 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CCDC103Q8IW40 242 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 IGDCC4Q8TDY8 1250 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 JADE3Q92613 823 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TBX3O15119 743 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RASSF9O75901 435 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 DLGAP3O95886 979 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ADRA2BP18089 450 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 OR1G1P47890 313 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 HARS2P49590 506 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PRIM2P49643 509 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 FAM83EQ2M2I3 478 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SNRNP27Q8WVK2 155 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MADDQ8WXG6 1647 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SMAPO00193 183 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 EXTL3O43909 919 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 VHLP40337 213 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 EFHC1Q5JVL4 640 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 DCP1BQ8IZD4 617 aaKnown RBP13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ANKS1AQ92625 1134 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 BHMTQ93088 406 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RGS5O15539 181 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SOAT2O75908 522 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PCSK1P29120 753 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RFC5P40937 340 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TP53BP2Q13625 1128 aa13.78□□□□□ -0.2
RAB11FIP4-210ENST00000585058 A0A1W2PQJ5 194 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PSMA4P25789 261 aaKnown RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 SERPINB5P36952 375 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 DDX39BQ13838 428 aaKnown RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CLEC16AQ2KHT3 1053 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 HDDC2Q7Z4H3 204 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 C1orf131Q8NDD1 294 aaKnown RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MTERF3Q96E29 417 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 RERGLQ9H628 205 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 APPL1Q9UKG1 709 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 PRR12Q9ULL5 1215 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 UBXN8O00124 270 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 DSG1Q02413 1049 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CSTF3Q12996 717 aaKnown RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 HIST2H2ACQ16777 129 aaPredicted RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 HIST2H2AA3Q6FI13 130 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 MIER2Q8N344 545 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CINPQ9BW66 212 aaPredicted RBP13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.2
RAB11FIP4-210ENST00000585058 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MAGEB2O15479 319 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ALOX15P16050 662 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TFE3P19532 575 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 TGM2P21980 687 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 EPHB2P29323 1055 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HSD17B3P37058 310 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 GJC2Q5T442 439 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 C10orf53Q8N6V4 93 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 HPDLQ96IR7 371 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 AXIN2Q9Y2T1 843 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CLTCQ00610 1675 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 VWA5AO00534 786 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RFX3P48380 749 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 MRPS35P82673 323 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 CDC16Q13042 620 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 RCN1Q15293 331 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ARMC6Q6NXE6 501 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 FGD2Q7Z6J4 655 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 KRT78Q8N1N4 520 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 PDS5AQ29RF7 1337 aaKnown RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 LINC00854A0A1B0GVQ3 168 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NCF1BA6NI72 391 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 LRRIQ3A6PVS8 624 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NCF1CA8MVU1 366 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 ZBTB22O15209 634 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 SUPT7LO94864 414 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NCF1P14598 390 aaPredicted RBP13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 NFIXQ14938 502 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 OTOAQ7RTW8 1153 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 LRRC34Q8IZ02 419 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 BLOC1S5Q8TDH9 187 aa13.77□□□□□ -0.21
RAB11FIP4-210ENST00000585058 LPAR1Q92633 364 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms