RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 IQCB1Q15051 598 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 CD300EQ496F6 205 aaPredicted RBP4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 TAF2Q6P1X5 1199 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 GAS2L3Q86XJ1 694 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 PCSK9Q8NBP7 692 aaKnown RBP4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 PSD4Q8NDX1 1056 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 IPCEF1Q8WWN9 437 aaPredicted RBP4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 TNIP3Q96KP6 325 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 BBC3Q96PG8 261 aaPredicted RBP4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 OSBPL9Q96SU4 736 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 MYD88Q99836 296 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 FAM50BQ9Y247 325 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 INSL6Q9Y581 213 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 PCDHGB6Q9Y5F9 930 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 RAD54BQ9Y620 910 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 SALL3Q9BXA9 1300 aa4.85□□□□□ -1.63
PPP4R1-227ENST00000583988 MAST3O60307 1309 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SPATA31A6Q5VVP1 1343 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 TRGV11A0A075B6L2 103 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 M0QYG6 137 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 TOR1BO14657 336 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SRGNP10124 158 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 KLRC1P26715 233 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 LRPAP1P30533 357 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 HTR3AP46098 478 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 CASP5P51878 434 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 MRPS21P82921 87 aaKnown RBP4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 BTKQ06187 659 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 DAG1Q14118 895 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 LONRF3Q496Y0 759 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 PRR16Q569H4 304 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SESTD1Q86VW0 696 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 MICU3Q86XE3 530 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 PRIMA1Q86XR5 153 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 ADGRG5Q8IZF4 528 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 FAM9AQ8IZU1 332 aaPredicted RBP4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 DNAJC5GQ8N7S2 189 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SIMC1Q8NDZ2 872 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 FAM46DQ8NEK8 389 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 BRI3BPQ8WY22 251 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SNX19Q92543 992 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 GJA10Q969M2 543 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 ZNF764Q96H86 408 aaPredicted RBP4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 ELAC2Q9BQ52 826 aaKnown RBP4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 MESP1Q9BRJ9 268 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 BRIP1Q9BX63 1249 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SMOC2Q9H3U7 446 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 PRDM13Q9H4Q3 707 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 PNPLA8Q9NP80 782 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 STARD7Q9NQZ5 370 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SLC52A1Q9NWF4 448 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 ZSCAN32Q9NX65 697 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 COL20A1Q9P218 1284 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 PHTF1Q9UMS5 762 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 SHOC2Q9UQ13 582 aa4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.84□□□□□ -1.63
PPP4R1-227ENST00000583988 F5H697 171 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 CCP110O43303 1012 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 TRIAP1O43715 76 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 INMTO95050 263 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 IFIT2P09913 472 aaKnown RBP4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 PIK3CBP42338 1070 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 NPTX2P47972 431 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 GCLCP48506 637 aaPredicted RBP4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 ALDH5A1P51649 535 aaPredicted RBP4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 UCP3P55916 312 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 LOXL3P58215 753 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 CCDC142Q17RM4 750 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 IL31Q6EBC2 164 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 FBXO42Q6P3S6 717 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 Q6ZNX1 250 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 SLC30A5Q8TAD4 765 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 NTN5Q8WTR8 489 aaPredicted RBP4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 MAML1Q92585 1016 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 TMEM125Q96AQ2 219 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 SLC39A13Q96H72 371 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 EIF2AQ9BY44 585 aaKnown RBP4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 DHX36Q9H2U1 1008 aaKnown RBP4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 R3HDMLQ9H3Y0 253 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 NLRC4Q9NPP4 1024 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 SACM1LQ9NTJ5 587 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 STK32BQ9NY57 414 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 SNX13Q9Y5W8 968 aa4.83□□□□□ -1.64
PPP4R1-227ENST00000583988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 PYCARD-AS1I3L0S3 204 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 AREL1O15033 823 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 DCLK1O15075 740 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 PROM1O43490 865 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 ZKSCAN1P17029 563 aaPredicted RBP4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 ITGALP20701 1170 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 NDUFV1P49821 464 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 ZNF543Q08ER8 600 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 OS9Q13438 667 aaPredicted RBP4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 MORC3Q14149 939 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 SF3B3Q15393 1217 aaKnown RBP4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 INSCQ1MX18 579 aa4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 PREPLQ4J6C6 727 aaPredicted RBP4.82□□□□□ -1.64
PPP4R1-227ENST00000583988 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms