RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 POLR3BQ9NW08 1133 aaPredicted RBP14.38□□□□□ -0.11
COPS3-214ENST00000577246 EVLQ9UI08 416 aaPredicted RBP14.38□□□□□ -0.11
COPS3-214ENST00000577246 CEP295Q9C0D2 2601 aa14.38□□□□□ -0.11
COPS3-214ENST00000577246 KIF26AQ9ULI4 1882 aaPredicted RBP14.38□□□□□ -0.11
COPS3-214ENST00000577246 NPHP3-ACAD11A0A0J9YXS1 232 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 TBCAO75347 108 aaKnown RBP14.37□□□□□ -0.11
COPS3-214ENST00000577246 NOL4O94818 638 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 IL18RAPO95256 599 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 KRT18P05783 430 aaKnown RBP14.37□□□□□ -0.11
COPS3-214ENST00000577246 DHPSP49366 369 aaPredicted RBP14.37□□□□□ -0.11
COPS3-214ENST00000577246 ACOT2P49753 483 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 CDR1P51861 262 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 ZNF131P52739 623 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 MYL7Q01449 175 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 KCNB1Q14721 858 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 EML3Q32P44 896 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 TMEM119Q4V9L6 283 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 ARSHQ5FYA8 562 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 ARL6IP4Q66PJ3 421 aaKnown RBP14.37□□□□□ -0.11
COPS3-214ENST00000577246 ANO7Q6IWH7 933 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 RASSF3Q86WH2 238 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 GPBP1Q86WP2 473 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 ZCCHC14Q8WYQ9 949 aaKnown RBP14.37□□□□□ -0.11
COPS3-214ENST00000577246 GATA6Q92908 595 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 CALML4Q96GE6 196 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 AK8Q96MA6 479 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 PLIN2Q99541 437 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 ACBD6Q9BR61 282 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 TMEM121BQ9BXQ6 578 aaPredicted RBP14.37□□□□□ -0.11
COPS3-214ENST00000577246 TPSD1Q9BZJ3 242 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 NEUROG3Q9Y4Z2 214 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 WNT6Q9Y6F9 365 aa14.37□□□□□ -0.11
COPS3-214ENST00000577246 VWA3AA6NCI4 1184 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 CDX4O14627 284 aaPredicted RBP14.36□□□□□ -0.11
COPS3-214ENST00000577246 HUS1O60921 280 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 TCF3P15923 654 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 PFKLP17858 780 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 SPINK2P20155 84 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 BYSLQ13895 437 aaKnown RBP14.36□□□□□ -0.11
COPS3-214ENST00000577246 UAP1L1Q3KQV9 507 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 HSF5Q4G112 596 aaPredicted RBP14.36□□□□□ -0.11
COPS3-214ENST00000577246 NAIF1Q69YI7 327 aaPredicted RBP14.36□□□□□ -0.11
COPS3-214ENST00000577246 LPCAT2Q7L5N7 544 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 TMEM86AQ8N2M4 240 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 RIN3Q8TB24 985 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 SPATA18Q8TC71 538 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 USP33Q8TEY7 942 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 PIGKQ92643 395 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 ZHX3Q9H4I2 956 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 AGO2Q9UKV8 859 aaKnown RBP14.36□□□□□ -0.11
COPS3-214ENST00000577246 MMP17Q9ULZ9 603 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 INVSQ9Y283 1065 aa14.36□□□□□ -0.11
COPS3-214ENST00000577246 SPAG17Q6Q759 2223 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 SRRM3A6NNA2 597 aaPredicted RBP14.35□□□□□ -0.11
COPS3-214ENST00000577246 H0Y626 953 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 TNFRSF10BO14763 440 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 MAP3K13O43283 966 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 TADA3O75528 432 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 TRIM16O95361 564 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 HOXD12P35452 270 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 GPR15P49685 360 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 IRX4P78413 519 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 MRPS21P82921 87 aaKnown RBP14.35□□□□□ -0.11
COPS3-214ENST00000577246 GTF2BQ00403 316 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 POSTNQ15063 836 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 CRY1Q16526 586 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 DDR2Q16832 855 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 CFAP221Q4G0U5 840 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 C2orf27AQ580R0 203 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 TRIM61Q5EBN2 209 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 INTS6LQ5JSJ4 861 aaKnown RBP14.35□□□□□ -0.11
COPS3-214ENST00000577246 SPDYCQ5MJ68 293 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 SLC39A4Q6P5W5 647 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 SPATA2LQ8IUW3 424 aaPredicted RBP14.35□□□□□ -0.11
COPS3-214ENST00000577246 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 DEFB124Q8NES8 71 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 SH3RF2Q8TEC5 729 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 WHAMMQ8TF30 809 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 EZH1Q92800 747 aaPredicted RBP14.35□□□□□ -0.11
COPS3-214ENST00000577246 FUBP3Q96I24 572 aaKnown RBP eCLIP14.35□□□□□ -0.11
COPS3-214ENST00000577246 DDX43Q9NXZ2 648 aaKnown RBP14.35□□□□□ -0.11
COPS3-214ENST00000577246 EHD2Q9NZN4 543 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 ARHGAP26Q9UNA1 814 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 TSC2P49815 1807 aa14.35□□□□□ -0.11
COPS3-214ENST00000577246 MYMKA6NI61 221 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 PATE3B3GLJ2 98 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 HDCP19113 662 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 CYP2F1P24903 491 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 PCSK1P29120 753 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 UBA7P41226 1012 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 SEC13P55735 322 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 SDHAF4Q5VUM1 108 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 MCTP1Q6DN14 999 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 TTC30AQ86WT1 665 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 SYT12Q8IV01 421 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 ARL14EPQ8N8R7 260 aaPredicted RBP14.34□□□□□ -0.11
COPS3-214ENST00000577246 MDGA1Q8NFP4 955 aa14.34□□□□□ -0.11
COPS3-214ENST00000577246 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms