RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
CDH11-216ENST00000569128 CLIC4Q9Y696 253 aa8.89□□□□□ -0.99
CDH11-216ENST00000569128 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 CA12O43570 354 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 TLR2O60603 784 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 KRT37O76014 449 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 BAG4O95429 457 aaKnown RBP8.88□□□□□ -0.99
CDH11-216ENST00000569128 ATP2A2P16615 1042 aaKnown RBP8.88□□□□□ -0.99
CDH11-216ENST00000569128 CTGFP29279 349 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 CAP1Q01518 475 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 CNTN2Q02246 1040 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 TRAF1Q13077 416 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 ZNF174Q15697 407 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 KCNMB1Q16558 191 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 EMC4Q5J8M3 183 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 PGM2L1Q6PCE3 622 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 RNF207Q6ZRF8 634 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 EP400NLQ6ZTU2 488 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 MILR1Q7Z6M3 343 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 ZSWIM9Q86XI8 627 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 CHST13Q8NET6 341 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 MYRIPQ8NFW9 859 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 BICD2Q8TD16 824 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 TBCKQ8TEA7 893 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 SLC5A5Q92911 643 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 GJA10Q969M2 543 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 PEX11GQ96HA9 241 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 UIMC1Q96RL1 719 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 USP28Q96RU2 1077 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 ANO3Q9BYT9 981 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 SLC6A17Q9H1V8 727 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 ACAD9Q9H845 621 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 ZCCHC17Q9NP64 241 aaKnown RBP8.88□□□□□ -0.99
CDH11-216ENST00000569128 A1CFQ9NQ94 594 aaKnown RBP8.88□□□□□ -0.99
CDH11-216ENST00000569128 C14orf119Q9NWQ9 140 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 RNF186Q9NXI6 227 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 CYP39A1Q9NYL5 469 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 NUDT5Q9UKK9 219 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 PCDHB6Q9Y5E3 794 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 HCFC2Q9Y5Z7 792 aa8.88□□□□□ -0.99
CDH11-216ENST00000569128 ASTN1O14525 1302 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 BIN1O00499 593 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 MAN2B1O00754 1011 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 TADA3O75528 432 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 SLC25A27O95847 323 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 PGK2P07205 417 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 MAP2K2P36507 400 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 GJA9P57773 515 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 GHRHRQ02643 423 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 NONOQ15233 471 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDH11-216ENST00000569128 ARHGAP44Q17R89 818 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 FAM110CQ1W6H9 321 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 FSTL4Q6MZW2 842 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 RPTNQ6XPR3 784 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 ANKRD35Q8N283 1001 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 IL31RAQ8NI17 732 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 LRGUKQ96M69 825 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 ARHGAP39Q9C0H5 1083 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 SMOC1Q9H4F8 434 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 MYOTQ9UBF9 498 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 SRPK3Q9UPE1 567 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 PCDHB4Q9Y5E5 795 aa8.87□□□□□ -0.99
CDH11-216ENST00000569128 SLC12A8A0AV02 714 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 FIBPO43427 364 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 MAFKO60675 156 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 TDP2O95551 362 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 IL33O95760 270 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 GLI1P08151 1106 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 GALEQ14376 348 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 ODF1Q14990 250 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 NR1I3Q14994 352 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 LETM2Q2VYF4 491 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 TTC38Q5R3I4 469 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 OTOP1Q7RTM1 612 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 GPR142Q7Z601 462 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 SHCBP1Q8NEM2 672 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 CYP2W1Q8TAV3 490 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 BOCQ9BWV1 1114 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 GLT8D2Q9H1C3 349 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 MROH8Q9H579 483 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 C1orf112Q9NSG2 853 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 MKS1Q9NXB0 559 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 RTEL1Q9NZ71 1219 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 DDX20Q9UHI6 824 aaKnown RBP8.86□□□□□ -0.99
CDH11-216ENST00000569128 FAM50BQ9Y247 325 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 LCTP09848 1927 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 TCHHQ07283 1943 aa8.86□□□□□ -0.99
CDH11-216ENST00000569128 RPTORQ8N122 1335 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 ZSWIM8A7E2V4 1837 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 OR14I1A6ND48 311 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 SLC37A4O43826 429 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 PAPLNO95428 1278 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 FCER1AP12319 257 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 MYCLP12524 364 aaPredicted RBP8.85□□□□□ -0.99
CDH11-216ENST00000569128 SERPINB3P29508 390 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 MCM7P33993 719 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 SREBF1P36956 1147 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 CCNA1P78396 465 aa8.85□□□□□ -0.99
CDH11-216ENST00000569128 PRR5P85299 388 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms