RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ALKAL1Q6UXT8 129 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 MON1AQ86VX9 555 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 IL17RCQ8NAC3 791 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 SPPL2BQ8TCT7 592 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 CDT1Q9H211 546 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 TMEM206Q9H813 350 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 UXTQ9UBK9 157 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-211ENST00000559460 PCDHA12Q9UN75 941 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-211ENST00000559460 PCDH15Q96QU1 1955 aa10.5□□□□□ -0.73
SMAD3-211ENST00000559460 KIAA1549LQ6ZVL6 1849 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 A0A1B0GTW7 788 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 ARHGEF35A5YM69 484 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 XPOTO43592 962 aaKnown RBP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 ZNF883P0CG24 379 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 CSH1P0DML2 217 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 CSH2P0DML3 217 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 XRCC6P12956 609 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 HNRNPLP14866 589 aaKnown RBP eCLIP10.49□□□□□ -0.736e-9■■□□□ 12.3
SMAD3-211ENST00000559460 IFNAR1P17181 557 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 ATF6P18850 670 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 SSRP1Q08945 709 aaKnown RBP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 SMARCB1Q12824 385 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 USP4Q13107 963 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 KCNB1Q14721 858 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 ZNF77Q15935 545 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 BROXQ5VW32 411 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 NUDT18Q6ZVK8 323 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 PRICKLE2Q7Z3G6 844 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 SLC41A1Q8IVJ1 513 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 FSIP1Q8NA03 581 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 RIN3Q8TB24 985 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 C2orf15Q8WU43 125 aaKnown RBP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 HAS1Q92839 578 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 BRF1Q92994 677 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 PNKPQ96T60 521 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 KIFC3Q9BVG8 833 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 MRPL4Q9BYD3 311 aaKnown RBP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 GAREM1Q9H706 876 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 ABI2Q9NYB9 513 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-211ENST00000559460 CALCOCO1Q9P1Z2 691 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 TUBGCP4Q9UGJ1 667 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 PHLPP2Q6ZVD8 1323 aa10.49□□□□□ -0.73
SMAD3-211ENST00000559460 IGHV1OR15-9A0A0B4J2B8 117 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-211ENST00000559460 CPLX1O14810 134 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 TNFSF14O43557 240 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 KAT7O95251 611 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 DEXIO95424 95 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 F11P03951 625 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 EDN1P05305 212 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 MCF2P10911 925 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 C6P13671 934 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 JUPP14923 745 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 TYMPP19971 482 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 OPRD1P41143 372 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 CSRP3P50461 194 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 PDE6CP51160 858 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 RESTQ13127 1097 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 SMAD1Q15797 465 aaKnown RBP10.48□□□□□ -0.73
SMAD3-211ENST00000559460 INAVAQ3KP66 663 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 NT5DC1Q5TFE4 455 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 TMPRSS12Q86WS5 348 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 METTL23Q86XA0 190 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 FAM177A1Q8N128 213 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-211ENST00000559460 THEM5Q8N1Q8 247 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 SH3RF2Q8TEC5 729 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 BSNDQ8WZ55 320 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 WBP1Q96G27 269 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 HSD17B14Q9BPX1 270 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 MIR1-1HGQ9H1L0 117 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 ARHGEF4Q9NR80 690 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 TOR4AQ9NXH8 423 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 CYP8B1Q9UNU6 501 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 HEMK1Q9Y5R4 338 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-211ENST00000559460 STK36Q9NRP7 1315 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 PTPRBP23467 1997 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 MYO18BQ8IUG5 2567 aa10.48□□□□□ -0.73
SMAD3-211ENST00000559460 HECTD1Q9ULT8 2610 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 MYO16Q9Y6X6 1858 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 A0A087WWV3 80 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 M0R2N6 131 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 CILPO75339 1184 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 IGHDP01880 384 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 HOXB2P14652 356 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 XBP1P17861 261 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 EIF2DP41214 584 aaKnown RBP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 PI4KAP42356 2102 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 MATR3P43243 847 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■■□□ 17.3
SMAD3-211ENST00000559460 CDR1P51861 262 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 KDSRQ06136 332 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 SCRN1Q12765 414 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 CALCRLQ16602 461 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 SDE2Q6IQ49 451 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 CPLX2Q6PUV4 134 aaKnown RBP10.47□□□□□ -0.73
SMAD3-211ENST00000559460 DHRS13Q6UX07 377 aa10.47□□□□□ -0.73
SMAD3-211ENST00000559460 Q6ZUG5 572 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms