RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 LINC00271P0C7V0 271 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 ZNF286BP0CG31 522 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 TGFB3P10600 412 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 GNAT1P11488 350 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 ATF7P17544 494 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 PFKLP17858 780 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 FPR2P25090 351 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 GRK2P25098 689 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 GRK3P35626 688 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 FLT3P36888 993 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 NFKB2Q00653 900 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 CAMK1Q14012 370 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 BTG3Q14201 252 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 VMACQ2NL98 169 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 CT47A1Q5JQC4 288 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 CELF3Q5SZQ8 465 aaKnown RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 PIK3R6Q5UE93 754 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 ARHGEF16Q5VV41 709 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 FRMPD2Q68DX3 1309 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 CEP68Q76N32 757 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 RASGRP2Q7LDG7 609 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 B3GNT8Q7Z7M8 397 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 IGSF22Q8N9C0 903 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 TBC1D5Q92609 795 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 ALG3Q92685 438 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 P2RX5Q93086 422 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 NKD2Q969F2 451 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 SPATA33Q96N06 139 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 TTC14Q96N46 770 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 C16orf70Q9BSU1 422 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 JAM3Q9BX67 310 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 PARD6AQ9NPB6 346 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 DBR1Q9UK59 544 aaKnown RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 ATP8A1Q9Y2Q0 1164 aa5.61□□□□□ -1.51
ATXN3-228ENST00000554592 USP15Q9Y4E8 981 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-228ENST00000554592 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 REV3LO60673 3130 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 ORC4O43929 436 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 NPTXRO95502 500 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 SMIM10L2AP0DMW4 78 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 SMIM10L2BP0DMW5 78 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 SNHG28P0DPA3 235 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 PDHBP11177 359 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 PYGMP11217 842 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 BMP7P18075 431 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 HOXA5P20719 270 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 HOXC8P31273 242 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 NRIP1P48552 1158 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 ZNF543Q08ER8 600 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 PTPN21Q16825 1174 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 USH1GQ495M9 461 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 MCTP2Q6DN12 878 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 DDX53Q86TM3 631 aaKnown RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 DDX42Q86XP3 938 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 UBALD2Q8IYN6 164 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 ADSSL1Q8N142 457 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 FNIP1Q8TF40 1166 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 SUSD6Q92537 303 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 ZNF689Q96CS4 500 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 TMEM169Q96HH4 297 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 SEC62Q99442 399 aaKnown RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 TLE6Q9H808 572 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 MLXIPQ9HAP2 919 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 ZBTB40Q9NUA8 1239 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 ANAPC4Q9UJX5 808 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 BRWD1Q9NSI6 2320 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 SCN10AQ9Y5Y9 1956 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 NAV1Q8NEY1 1877 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 GBF1Q92538 1859 aa5.6□□□□□ -1.51
ATXN3-228ENST00000554592 COL11A1P12107 1806 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-228ENST00000554592 TRANK1O15050 2925 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ABCB11O95342 1321 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ADGRA3Q8IWK6 1321 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 FSD2A1L4K1 749 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CCDC66A2RUB6 948 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 FAM47E-STBD1D6RA91 191 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 H7BY64 318 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 DGKIO75912 1065 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CSPG5O95196 566 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 GGPS1O95749 300 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CHRNA1P02708 482 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 ITGB1P05556 798 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 CDK11BP21127 795 aaKnown RBP5.59□□□□□ -1.51
ATXN3-228ENST00000554592 DNAJB1P25685 340 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 SLC6A11P48066 632 aa5.59□□□□□ -1.51
ATXN3-228ENST00000554592 DNM2P50570 870 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms