RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, human

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO1-222	ENST00000553154	P4HA1	P13674	534 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CEBPB	P17676	345 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	PTPN2	P17706	415 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	FSHR	P23945	695 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	FCAR	P24071	287 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	ZNF132	P52740	706 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CUL2	Q13617	745 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	MAPRE1	Q15691	268 aa	Known RBP	10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	PABPC1L	Q4VXU2	614 aa	Known RBP	10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	MDH1B	Q5I0G3	518 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	VSTM1	Q6UX27	236 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	GAREM2	Q75VX8	874 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	OTOP3	Q7RTS5	596 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	FAM35A	Q86V20	835 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	RNF135	Q8IUD6	432 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	ARHGEF19	Q8IW93	802 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	TDRD5	Q8NAT2	981 aa	Known RBP	10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	LEMD2	Q8NC56	503 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	ZMIZ2	Q8NF64	920 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	SHKBP1	Q8TBC3	707 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	FGF13	Q92913	245 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	KAT5	Q92993	513 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	TCEAL4	Q96EI5	215 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	TRMT2B	Q96GJ1	504 aa	Known RBP	10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	RPGRIP1	Q96KN7	1286 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CEP295NL	Q96MC4	621 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	KREMEN1	Q96MU8	473 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	LRFN3	Q9BTN0	628 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	IMPG2	Q9BZV3	1241 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	SNX25	Q9H3E2	840 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CSNK1G1	Q9HCP0	422 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	SIX2	Q9NPC8	291 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	ANO10	Q9NW15	660 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CDH7	Q9ULB5	785 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CNTN6	Q9UQ52	1028 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	C5orf42	Q9H799	3197 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	NCAN	O14594	1321 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	PTPRD	P23468	1912 aa		10.78	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CFAP54	Q96N23	3096 aa		10.77	□□□□□ -0.68
CALCOCO1-222	ENST00000553154	CLDN5	O00501	218 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	F11	P03951	625 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	EEF1G	P26641	437 aa	Known RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	RAD23B	P54727	409 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	GCNT1	Q02742	428 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	ORC1	Q13415	861 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	HTR4	Q13639	388 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	MAN2A1	Q16706	1144 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	MGAT5B	Q3V5L5	792 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SMYD5	Q6GMV2	418 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	PHLDB3	Q6NSJ2	640 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	TRIM65	Q6PJ69	517 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	C4orf50	Q6ZRC1	276 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	GET4	Q7L5D6	327 aa	Predicted RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	ACOT1	Q86TX2	421 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SLC4A11	Q8NBS3	891 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	EHBP1	Q8NDI1	1231 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	STKLD1	Q8NE28	680 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SPATA17	Q96L03	361 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	C8orf48	Q96LL4	319 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SEPT5	Q99719	369 aa	Predicted RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	BPIFA3	Q9BQP9	254 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	ZSWIM1	Q9BR11	485 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	CORO1B	Q9BR76	489 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	TTLL2	Q9BWV7	592 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	INTS2	Q9H0H0	1204 aa	Known RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	PIDD1	Q9HB75	910 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	CISH	Q9NSE2	258 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	IL37	Q9NZH6	218 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	NR2E1	Q9Y466	385 aa		10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	TCF20	Q9UGU0	1960 aa	Known RBP	10.77	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	FAM92A	A1XBS5	289 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SPDYE4	A6NLX3	237 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SLC38A8	A6NNN8	435 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	KCNJ18	B7U540	433 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	HHLA1	C9JL84	531 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	PI4K2B	G5E9Z4	385 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	TNFRSF10B	O14763	440 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	CCDC130	P13994	396 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SP100	P23497	879 aa	Predicted RBP	10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	BDNF	P23560	247 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	ALDH1A3	P47895	512 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	EPHB3	P54753	998 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	USP46	P62068	366 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	RPL10A	P62906	217 aa	Known RBP	10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	MYL5	Q02045	173 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	APBA1	Q02410	837 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	KCNMA1	Q12791	1236 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	MTMR3	Q13615	1198 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	KCNJ12	Q14500	433 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	PTPN21	Q16825	1174 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	DDR2	Q16832	855 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	TCP11X2	Q5H9J9	407 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	SDHAF4	Q5VUM1	108 aa		10.76	□□□□□ -0.69
CALCOCO1-222	ENST00000553154	ARHGAP17	Q68EM7	881 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms