RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 KCTD16Q68DU8 428 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 UBA3Q8TBC4 463 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 ACSF2Q96CM8 615 aaPredicted RBP14.94□□□□□ -0.02
LDB3-207ENST00000542786 KATNAL1Q9BW62 490 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 ZFYVE28Q9HCC9 887 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 DDX56Q9NY93 547 aaKnown RBP14.94□□□□□ -0.02
LDB3-207ENST00000542786 GRIN2DO15399 1336 aa14.94□□□□□ -0.02
LDB3-207ENST00000542786 SCN10AQ9Y5Y9 1956 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 TNPO2O14787 897 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 LIASO43766 372 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 CYBAP13498 195 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 CAPN2P17655 700 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 ACTN2P35609 894 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 NKX3-2P78367 333 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 GLRA4Q5JXX5 417 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 AGBL2Q5U5Z8 902 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 CYP4V2Q6ZWL3 525 aaPredicted RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 TTC30AQ86WT1 665 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 EMC1Q8N766 993 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 C12orf29Q8N999 325 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 SMG8Q8ND04 991 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 BEST2Q8NFU1 509 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 GRK7Q8WTQ7 553 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 TSPAN18Q96SJ8 248 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 FAM118BQ9BPY3 351 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 UPF3AQ9H1J1 476 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 TSPAN16Q9UKR8 245 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 PIN4Q9Y237 131 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 SMIM28A0A1B0GU29 152 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 ERICH4A6NGS2 130 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 SPTLC1O15269 473 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 DUSP11O75319 330 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 SHBGP04278 402 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 AKR1A1P14550 325 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 AKAP5P24588 427 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 YARSP54577 528 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 STILQ15468 1287 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 SOWAHAQ2M3V2 549 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 GOLGA7BQ2TAP0 167 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 NME8Q8N427 588 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 ARRDC4Q8NCT1 418 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 KBTBD7Q8WVZ9 684 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 SNF8Q96H20 258 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 PIWIL1Q96J94 861 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 ZIC5Q96T25 663 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 SLC4A5Q9BY07 1137 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 SEMA4AQ9H3S1 761 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 RNF19AQ9NV58 838 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 MTRF1LQ9UGC7 380 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 FEZ2Q9UHY8 353 aaPredicted RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 UBQLN1Q9UMX0 589 aaKnown RBP14.93□□□□□ -0.02
LDB3-207ENST00000542786 EFR3BQ9Y2G0 817 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 TLL2Q9Y6L7 1015 aa14.93□□□□□ -0.02
LDB3-207ENST00000542786 GAS8O95995 478 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 MYZAPP0CAP1 466 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 RARGP13631 454 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 ITIH2P19823 946 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 EIF3BP55884 814 aaKnown RBP14.92□□□□□ -0.02
LDB3-207ENST00000542786 GJA9P57773 515 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 SOX4Q06945 474 aaPredicted RBP14.92□□□□□ -0.02
LDB3-207ENST00000542786 OASLQ15646 514 aaKnown RBP14.92□□□□□ -0.02
LDB3-207ENST00000542786 TFDP3Q5H9I0 405 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 ARHGAP17Q68EM7 881 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 LRRC31Q6UY01 552 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 FAM228AQ86W67 206 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 KHSRPQ92945 711 aaKnown RBP eCLIP14.92□□□□□ -0.02
LDB3-207ENST00000542786 NKD2Q969F2 451 aaPredicted RBP14.92□□□□□ -0.02
LDB3-207ENST00000542786 TLCD1Q96CP7 247 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 TMEM109Q9BVC6 243 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 GDAP2Q9NXN4 497 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 SNX9Q9Y5X1 595 aa14.92□□□□□ -0.02
LDB3-207ENST00000542786 C2CD4BA6NLJ0 364 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 E5RJQ4 531 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 TULP2O00295 520 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 TJP3O95049 919 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 SETSIPP0DME0 302 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 FGFR1P11362 822 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 TM4SF4P48230 202 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 IRAK1P51617 712 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 ACAP1Q15027 740 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 PPP1R26Q5T8A7 1209 aaPredicted RBP14.91□□□□□ -0.02
LDB3-207ENST00000542786 FAM183BPQ6ZVS7 135 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 ACOT1Q86TX2 421 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 UNC93AQ86WB7 457 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
LDB3-207ENST00000542786 SLC35B2Q8TB61 432 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 SLC35F5Q8WV83 523 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 PEBP4Q96S96 227 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 ASIC3Q9UHC3 531 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 DNPEPQ9ULA0 475 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 IPPQ9Y573 584 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 LRRD1A4D1F6 860 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 DPYSL4O14531 572 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 HCRTO43612 131 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 KPNA6O60684 536 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 CD4P01730 458 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 NR1D1P20393 614 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 CHKAP35790 457 aa14.91□□□□□ -0.02
LDB3-207ENST00000542786 CETN2P41208 172 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms