RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GPR3P46089 330 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 GLRBP48167 497 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 GNAQP50148 359 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 NCKAP1LP55160 1127 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 SNAP25P60880 206 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 NECTIN1Q15223 517 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 PWP2Q15269 919 aaKnown RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CT83Q5H943 113 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 PRAMEF19Q5SWL8 479 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 RNF207Q6ZRF8 634 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 PRR23BQ6ZRT6 265 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CYB5R4Q7L1T6 521 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 B3GNT8Q7Z7M8 397 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 ADGRF4Q8IZF3 695 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CTCFLQ8NI51 663 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 SMARCC2Q8TAQ2 1214 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 MZB1Q8WU39 189 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 KCNN1Q92952 543 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 MAP3K14Q99558 947 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 LZTS2Q9BRK4 669 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 BTBD2Q9BX70 525 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 UBA5Q9GZZ9 404 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 LSG1Q9H089 658 aaKnown RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 CNTD2Q9H8S5 307 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 VAT1LQ9HCJ6 419 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 A1CFQ9NQ94 594 aaKnown RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 GEMIN8Q9NWZ8 242 aaKnown RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 ANKRD6Q9Y2G4 727 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 GIT1Q9Y2X7 761 aa6.15□□□□□ -1.42
CPSF7-220ENST00000541963 MRPL11Q9Y3B7 192 aaKnown RBP6.15□□□□□ -1.42
CPSF7-220ENST00000541963 ZNF536O15090 1300 aa6.15□□□□□ -1.43
CPSF7-220ENST00000541963 ABCB11O95342 1321 aa6.15□□□□□ -1.43
CPSF7-220ENST00000541963 WDR19Q8NEZ3 1342 aa6.15□□□□□ -1.43
CPSF7-220ENST00000541963 LAMA4Q16363 1823 aa6.15□□□□□ -1.43
CPSF7-220ENST00000541963 GOLGA6CA6NDK9 693 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 GOLGA6BA6NDN3 693 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 DNM1LO00429 736 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 EPB41L2O43491 1005 aaKnown RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 TSPAN6O43657 245 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 PRC1O43663 620 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 DUSP11O75319 330 aaKnown RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 SNAI1O95863 264 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 PRLP01236 227 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 C8BP07358 591 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 CLEC2LP0C7M8 214 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 GOLGA6DP0CG33 693 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 XPAP23025 273 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 SMARCA1P28370 1054 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 LIFRP42702 1097 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 MANFP55145 182 aaKnown RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 KRT85P78386 507 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 NFATC3Q12968 1075 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 ACVR2BQ13705 512 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 BAATQ14032 418 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 GRM4Q14833 912 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 PCBP2Q15366 365 aaKnown RBP eCLIP6.14□□□□□ -1.431e-6■■■■□ 24.4
CPSF7-220ENST00000541963 CDC37Q16543 378 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 LIPIQ6XZB0 460 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 ARMCX2Q7L311 632 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 CHST3Q7LGC8 479 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 UBE2Q1Q7Z7E8 422 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 CMIPQ8IY22 773 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 RAVER1Q8IY67 606 aaKnown RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 SAMD3Q8N6K7 520 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 FAM133AQ8N9E0 248 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 FBXO15Q8NCQ5 510 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 TRPV1Q8NER1 839 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 DNERQ8NFT8 737 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 NUP133Q8WUM0 1156 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 NEK1Q96PY6 1258 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 AMNQ9BXJ7 453 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 SENP6Q9GZR1 1112 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 XPNPEP3Q9NQH7 507 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 CCM2LQ9NUG4 571 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 GOLGA6AQ9NYA3 693 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 MAP3K20Q9NYL2 800 aaKnown RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 CYP39A1Q9NYL5 469 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 MBD1Q9UIS9 605 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 ZHX1Q9UKY1 873 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 PCDHA5Q9Y5H7 936 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 NUMBLQ9Y6R0 609 aa6.14□□□□□ -1.43
CPSF7-220ENST00000541963 KIAA0100Q14667 2235 aaKnown RBP6.14□□□□□ -1.43
CPSF7-220ENST00000541963 PLXNA1Q9UIW2 1896 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 PRSS38A1L453 326 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 N4BP3O15049 544 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 ZBTB5O15062 677 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 H2AFYO75367 372 aaKnown RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 CALML3P27482 149 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 PSMA5P28066 241 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 CDR1P51861 262 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 SLC5A3P53794 718 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 MRPS9P82933 396 aaKnown RBP6.13□□□□□ -1.43
CPSF7-220ENST00000541963 CNTN2Q02246 1040 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 USH1GQ495M9 461 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 MUM1L1Q5H9M0 696 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 TOR2AQ5JU69 321 aa6.13□□□□□ -1.43
CPSF7-220ENST00000541963 GJC2Q5T442 439 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms