RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 POLR1BQ9H9Y6 1135 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 LBPP18428 481 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 KPNA1P52294 538 aaPredicted RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 LIMA1Q9UHB6 759 aaKnown RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 DYRK1BQ9Y463 629 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 LRRC14BA6NHZ5 514 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 PPP1R18Q6NYC8 613 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 FOXP4Q8IVH2 680 aaPredicted RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 UBE2OQ9C0C9 1292 aaKnown RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 COMMD8Q9NX08 183 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 IGF2BP3O00425 579 aaKnown RBP eCLIP15.93■□□□□ 0.147e-8■■■■□ 24.2
HMGA2-210ENST00000541363 KRT34O76011 436 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 PCNAP12004 261 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 PAICSP22234 425 aaKnown RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 SERPINB5P36952 375 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 RXRGP48443 463 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 CDC42EP1Q00587 391 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 OTUD4Q01804 1114 aaKnown RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 TRAF2Q12933 501 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 LPIN1Q14693 890 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 PNKPQ96T60 521 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 SMAPO00193 183 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 ARHGAP15Q53QZ3 475 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 ENOPH1Q9UHY7 261 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 COL17A1Q9UMD9 1497 aaPredicted RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 P4HBP07237 508 aaKnown RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 CASP12Q6UXS9 341 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 SPATA4Q8NEY3 305 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 ATP8B4Q8TF62 1192 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 ZNF512Q96ME7 567 aaPredicted RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 ABCB1P08183 1280 aaPredicted RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 OXCT2Q9BYC2 517 aaPredicted RBP15.93■□□□□ 0.14
HMGA2-210ENST00000541363 ATAD3AQ9NVI7 634 aa15.93■□□□□ 0.14
HMGA2-210ENST00000541363 MTSS1O43312 755 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 RCVRNP35243 200 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 RHAGQ02094 409 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 CCNIQ14094 377 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 ROPN1BQ9BZX4 212 aaPredicted RBP15.92■□□□□ 0.14
HMGA2-210ENST00000541363 MTIF3Q9H2K0 278 aaKnown RBP15.92■□□□□ 0.14
HMGA2-210ENST00000541363 ROPN1Q9HAT0 212 aaPredicted RBP15.92■□□□□ 0.14
HMGA2-210ENST00000541363 CCDC189A1A4V9 331 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 CCT8L1PA6NM43 557 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 DDI2Q5TDH0 399 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 KIF2BQ8N4N8 673 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 CAMKK1Q8N5S9 505 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 PHF20L1A8MW92 1017 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 THRAP10827 490 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 EPS8Q12929 822 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 ZNF284Q2VY69 593 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 KLHL28Q9NXS3 571 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 SIK3Q9Y2K2 1263 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 KIF28PB7ZC32 967 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 TPST1O60507 370 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 MCEEQ96PE7 176 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 EFCAB1Q9HAE3 211 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 BTN3A3O00478 584 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 FCER1AP12319 257 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 ACADSBP45954 432 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 STARP49675 285 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 EFNA5P52803 228 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 FKBP14Q9NWM8 211 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 POTEMA6NI47 508 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 EXTL3O43909 919 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 TSPAN9O75954 239 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 ALDH1A3P47895 512 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 SNRNP48Q6IEG0 339 aaKnown RBP15.92■□□□□ 0.14
HMGA2-210ENST00000541363 SUGP1Q8IWZ8 645 aaKnown RBP15.92■□□□□ 0.14
HMGA2-210ENST00000541363 DYNLL2Q96FJ2 89 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 DUSP12Q9UNI6 340 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
HMGA2-210ENST00000541363 TFE3P19532 575 aaPredicted RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 IL5RAQ01344 420 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 CAMK1Q14012 370 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 DGKDQ16760 1214 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 SPANXN2Q5MJ10 180 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 TMEM26Q6ZUK4 368 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 MAGEB10Q96LZ2 347 aaPredicted RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 PVALEFA0A1B0GWK0 134 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 PRR23AA6NEV1 266 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 CLPTM1O96005 669 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 RESTQ13127 1097 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 DCTN2Q13561 401 aaKnown RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 SEPT5Q99719 369 aaPredicted RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 RAVER2Q9HCJ3 691 aaKnown RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 SMNDC1O75940 238 aaKnown RBP eCLIP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 CPSF4O95639 269 aaKnown RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 ALOX12P18054 663 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 SERPINB8P50452 374 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 ATP1A4Q13733 1029 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 CCDC185Q8N715 623 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 SLC35G2Q8TBE7 412 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 KCTD14Q9BQ13 255 aaPredicted RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 PIN4Q9Y237 131 aaKnown RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 TARSP26639 723 aaKnown RBP15.91■□□□□ 0.14
HMGA2-210ENST00000541363 PSMB9P28065 219 aa15.91■□□□□ 0.14
HMGA2-210ENST00000541363 CCDC157Q569K6 752 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms