RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 IPPQ9Y573 584 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SNX5Q9Y5X3 404 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 CAND2O75155 1236 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SEC24DO94855 1032 aaPredicted RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 GEMIN4P57678 1058 aaKnown RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ACCSLQ4AC99 568 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 MTMR8Q96EF0 704 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 C20orf96Q9NUD7 363 aaPredicted RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 F8VZ95 297 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 PCSK7Q16549 785 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 KCNT1Q5JUK3 1230 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 TTC39BQ5VTQ0 682 aaPredicted RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 ATPAF2Q8N5M1 289 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 SLC7A14Q8TBB6 771 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 FBXO25Q8TCJ0 367 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 PPCSQ9HAB8 311 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 TMBIM4Q9HC24 238 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 HMBSP08397 361 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 TCF7P36402 384 aaPredicted RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 DNAL1Q4LDG9 190 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 MEI1Q5TIA1 1274 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 PABPC5Q96DU9 382 aaKnown RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 TJP2Q9UDY2 1190 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 AIM2O14862 343 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 CHI3L2Q15782 390 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 RIBC1Q8N443 379 aaPredicted RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 ARMC2Q8NEN0 867 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 MTG1Q9BT17 334 aaPredicted RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 MOSPD1Q9UJG1 213 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 MTO1Q9Y2Z2 717 aaKnown RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 TRIM49D1C9J1S8 452 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 HNRNPH1P31943 449 aaKnown RBP15.15■□□□□ 0.02
CACNB1-206ENST00000539338 SERPINB4P48594 390 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 TMEM132BQ14DG7 1078 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 ASAP3Q8TDY4 903 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 MTBPQ96DY7 904 aa15.15■□□□□ 0.02
CACNB1-206ENST00000539338 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 KRT34O76011 436 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 TARSP26639 723 aaKnown RBP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 NPTX2P47972 431 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 CNGA3Q16281 694 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 ACTRT1Q8TDG2 376 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 E2F7Q96AV8 911 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 ZSCAN5CA6NGD5 496 aaPredicted RBP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 FBXL16Q8N461 479 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 GPRASP2Q96D09 838 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 TRIM62Q9BVG3 475 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 RIOX1Q9H6W3 641 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 PRMT7Q9NVM4 692 aaPredicted RBP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 ARHGEF38Q9NXL2 777 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 SPAG6O75602 509 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 CCND1P24385 295 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 PPIGQ13427 754 aaKnown RBP eCLIP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 C16orf87Q6PH81 154 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 ZNF720Q7Z2F6 126 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 SKA1Q96BD8 255 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 SPATA17Q96L03 361 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 OLFM3Q96PB7 478 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 MTMR12Q9C0I1 747 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 ANGPT2O15123 496 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 GPR182O15218 404 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 RRM1P23921 792 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 SOX11P35716 441 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 PRPF39Q86UA1 669 aaKnown RBP15.14■□□□□ 0.01
CACNB1-206ENST00000539338 TAS1R2Q8TE23 839 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 FAM111AQ96PZ2 611 aa15.14■□□□□ 0.01
CACNB1-206ENST00000539338 DDTLA6NHG4 134 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 MYL2P10916 166 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 TCN1P20061 433 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 IL10P22301 178 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 THPOP40225 353 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 CCDC33Q8N5R6 958 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 PSTPIP1O43586 416 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 TLR2O60603 784 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 HMGCRP04035 888 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 POLBP06746 335 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 SPRP35270 261 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 BACE1P56817 501 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ST8SIA6P61647 398 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 OCA2Q04671 838 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 AMHR2Q16671 573 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 NT5DC1Q5TFE4 455 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ARID3BQ8IVW6 561 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 SLC25A41Q8N5S1 370 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 EMILIN2Q9BXX0 1053 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 CD248Q9HCU0 757 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 DGKIO75912 1065 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 URODP06132 367 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 ZBTB48P10074 688 aaPredicted RBP15.13■□□□□ 0.01
CACNB1-206ENST00000539338 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 IPMKQ8NFU5 416 aa15.13■□□□□ 0.01
CACNB1-206ENST00000539338 MMTAG2Q9BU76 263 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms