RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 RUNX3Q13761 415 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 STK38Q15208 465 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CC2D1AQ6P1N0 951 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 MON1AQ86VX9 555 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SPATA2LQ8IUW3 424 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ADGRF2Q8IZF7 708 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 PKMYT1Q99640 499 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TNMDQ9H2S6 317 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SIX4Q9UIU6 781 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 GABRDO14764 452 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HRO43593 1189 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 NOL4O94818 638 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 RETP07949 1114 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 PCSK1P29120 753 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SPEM2Q0P670 501 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SURF1Q15526 300 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LMBRD2Q68DH5 695 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HEATR6Q6AI08 1181 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 OSTM1Q86WC4 334 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LINC00301Q8NCQ3 95 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TRMT2BQ96GJ1 504 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 MYRFLQ96LU7 910 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 EBF3Q9H4W6 596 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 PARD6AQ9NPB6 346 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HPS4Q9NQG7 708 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 INTS13Q9NVM9 706 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 C2orf42Q9NWW7 574 aa21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CDV3Q9UKY7 258 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ZNF233A6NK53 670 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TNNC2P02585 160 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HOXA6P31267 233 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ATXN1P54253 815 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 AMPD2Q01433 879 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 GRSF1Q12849 480 aaKnown RBP eCLIP21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ZNF268Q14587 947 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SOWAHAQ2M3V2 549 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CFAP221Q4G0U5 840 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TRIM68Q6AZZ1 485 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 DPH6Q7L8W6 267 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FUBP3Q96I24 572 aaKnown RBP eCLIP21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CUEDC2Q9H467 287 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CHD8Q9HCK8 2581 aa21.1■□□□□ 0.97
TNFRSF1B-204ENST00000536782 KMT2BQ9UMN6 2715 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 EML5Q05BV3 1969 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 K7ELQ4 463 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SPTLC2O15270 562 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HCRTO43612 131 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LRP3O75074 770 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 AMPD3Q01432 767 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SRSF5Q13243 272 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TMEM196Q5HYL7 178 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CBWD2Q8IUF1 395 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 GLIS3Q8NEA6 775 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 OR5B17Q8NGF7 314 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HPS3Q969F9 1004 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HPDLQ96IR7 371 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 KIAA1586Q9HCI6 787 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TRPC7Q9HCX4 862 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 KBTBD4Q9NVX7 518 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
TNFRSF1B-204ENST00000536782 OTOL1A6NHN0 477 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TRDMT1O14717 391 aaKnown RBP21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 PPP6R2O75170 966 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TADA3O75528 432 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FAM160A1Q05DH4 1040 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 PDGFRLQ15198 375 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 E2F4Q16254 413 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CCDC142Q17RM4 750 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 DUOXA2Q1HG44 320 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FSTL4Q6MZW2 842 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FAM171BQ6P995 826 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 C4orf50Q6ZRC1 276 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SCN4BQ8IWT1 228 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FSIP1Q8NA03 581 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ZNF396Q96N95 335 aaPredicted RBP21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 RTKNQ9BST9 563 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TRIM9Q9C026 710 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 HSPBP1Q9NZL4 362 aa21.08■□□□□ 0.97
TNFRSF1B-204ENST00000536782 MAP1BP46821 2468 aaKnown RBP21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PTPRJQ12913 1337 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 EIF3DO15371 548 aaKnown RBP eCLIP21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ATG13O75143 517 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 USP17L7P0C7H9 530 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ARSAP15289 507 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 HOXC13P31276 330 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MAGEA11P43364 429 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ASIC1P78348 528 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CEP68Q76N32 757 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 LIMS2Q7Z4I7 341 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 WDR5BQ86VZ2 330 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 WDR49Q8IV35 697 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 RIN3Q8TB24 985 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 KBTBD7Q8WVZ9 684 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DHX58Q96C10 678 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CHFRQ96EP1 664 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SYT15Q9BQS2 421 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 BACH2Q9BYV9 841 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TFIP11Q9UBB9 837 aaKnown RBP21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MAGEC2Q9UBF1 373 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms