RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 PNMA5Q96PV4 448 aa11.96□□□□□ -0.49
CTNND1-224ENST00000530068 SLC32A1Q9H598 525 aa11.96□□□□□ -0.49
CTNND1-224ENST00000530068 EVLQ9UI08 416 aaPredicted RBP11.96□□□□□ -0.49
CTNND1-224ENST00000530068 ANKRD11Q6UB99 2663 aaPredicted RBP11.96□□□□□ -0.5
CTNND1-224ENST00000530068 DCLK1O15075 740 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 TRAK2O60296 914 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 HUS1O60921 280 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 KRT18P05783 430 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 CKMP06732 381 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 PFKLP17858 780 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 NMT1P30419 496 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 RDXP35241 583 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 ZNF131P52739 623 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 GTF2BQ00403 316 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 MYL7Q01449 175 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 USP4Q13107 963 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 BYSLQ13895 437 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 ARSHQ5FYA8 562 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 LMBRD2Q68DH5 695 aaPredicted RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 TMEM86AQ8N2M4 240 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 KIAA1958Q8N8K9 716 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 CNOT6LQ96LI5 555 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 MYRFLQ96LU7 910 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 PLIN2Q99541 437 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 ACBD6Q9BR61 282 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 PI4K2AQ9BTU6 479 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 NUSAP1Q9BXS6 441 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 TRPC7Q9HCX4 862 aa11.95□□□□□ -0.5
CTNND1-224ENST00000530068 AGO2Q9UKV8 859 aaKnown RBP11.95□□□□□ -0.5
CTNND1-224ENST00000530068 FRYQ5TBA9 3013 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 NPHP3-ACAD11A0A0J9YXS1 232 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 VWA3AA6NCI4 1184 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 GIPC1O14908 333 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 NOL4O94818 638 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 TCF3P15923 654 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 PCSK1P29120 753 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 UBA7P41226 1012 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 ACOT2P49753 483 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 MRPS21P82921 87 aaKnown RBP11.94□□□□□ -0.5
CTNND1-224ENST00000530068 KCNB1Q14721 858 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 ZNF77Q15935 545 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 EML3Q32P44 896 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 HSF5Q4G112 596 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-224ENST00000530068 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 LPCAT2Q7L5N7 544 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
CTNND1-224ENST00000530068 FUBP3Q96I24 572 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTNND1-224ENST00000530068 SPACA7Q96KW9 195 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 CEP295NLQ96MC4 621 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 MMP17Q9ULZ9 603 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 WASF3Q9UPY6 502 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 STYXL1Q9Y6J8 313 aa11.94□□□□□ -0.5
CTNND1-224ENST00000530068 NUP210Q8TEM1 1887 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 MYMKA6NI61 221 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 LHX1P48742 406 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 DHPSP49366 369 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 COL9A2Q14055 689 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 ACAP1Q15027 740 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 DDR2Q16832 855 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 UAP1L1Q3KQV9 507 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 SPDYCQ5MJ68 293 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 SLC39A4Q6P5W5 647 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 RASSF3Q86WH2 238 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 SPATA2LQ8IUW3 424 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 LRRC52Q8N7C0 313 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 TTC16Q8NEE8 873 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 SH3RF2Q8TEC5 729 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 HVCN1Q96D96 273 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 SCNM1Q9BWG6 230 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 ST6GALNAC4Q9H4F1 302 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 ZHX3Q9H4I2 956 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 POLR3BQ9NW08 1133 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 EHD2Q9NZN4 543 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 ARHGAP26Q9UNA1 814 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 NEUROG3Q9Y4Z2 214 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 WNT6Q9Y6F9 365 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 PDCD11Q14690 1871 aaKnown RBP11.93□□□□□ -0.5
CTNND1-224ENST00000530068 PKD1L2Q7Z442 2459 aa11.93□□□□□ -0.5
CTNND1-224ENST00000530068 UPK3BL1B0FP48 263 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 UPK3BL2E5RIL1 263 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 H0Y626 953 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 CDX4O14627 284 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-224ENST00000530068 SLC9A3R1O14745 358 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-224ENST00000530068 TNFRSF10BO14763 440 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 MAP3K13O43283 966 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 TRIM16O95361 564 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 BMP15O95972 392 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 HDCP19113 662 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 HOXD12P35452 270 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 MAGEA11P43364 429 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 CDR1P51861 262 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 IRX4P78413 519 aa11.92□□□□□ -0.5
CTNND1-224ENST00000530068 DHX8Q14562 1220 aaKnown RBP11.92□□□□□ -0.5
CTNND1-224ENST00000530068 CFAP221Q4G0U5 840 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms