RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SRSF3P84103 164 aaKnown RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 PRR5P85299 388 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 SATB1Q01826 763 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 CREB5Q02930 508 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 SSPNQ14714 243 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 TTF1Q15361 905 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 LINC00303Q3SY05 128 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 BICRALQ6AI39 1079 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 CNKSR3Q6P9H4 555 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 TMC6Q7Z403 805 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 PTRH1Q86Y79 214 aaKnown RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 SCYL3Q8IZE3 742 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 NGEFQ8N5V2 710 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 SPPL3Q8TCT6 385 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 MZB1Q8WU39 189 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 RELTQ969Z4 430 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 NAF1Q96HR8 494 aaKnown RBP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 AMNQ9BXJ7 453 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 COA1Q9GZY4 146 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 RNF38Q9H0F5 515 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 TRIM39Q9HCM9 518 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.77□□□□□ -1.81
CSDE1-209ENST00000525132 MARCH2Q9P0N8 246 aa3.77□□□□□ -1.81
CSDE1-209ENST00000525132 CENPJQ9HC77 1338 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 ZC3H12DA2A288 527 aaKnown RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 C22orf46C9J442 243 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 TSPAN6O43657 245 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 PDE8AO60658 829 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 CAND2O75155 1236 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 RFPL3O75679 317 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 FUCA1P04066 466 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 CD1EP15812 388 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 ADORA2AP29274 412 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 THBS2P35442 1172 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 UQCRFS1P47985 274 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 GUCY2FP51841 1108 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 HMGCS2P54868 508 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 LINC00310P59036 64 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 PSMC6P62333 389 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 ITIH3Q06033 890 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 OS9Q13438 667 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 LSAMPQ13449 338 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 UBE4AQ14139 1066 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 SLC9A5Q14940 896 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 PPP2R5AQ15172 486 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 ZNF124Q15973 351 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 AMOTQ4VCS5 1084 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 VWA3BQ502W6 1294 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 TICAM2Q86XR7 235 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 SLC7A14Q8TBB6 771 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 SNRNP27Q8WVK2 155 aaKnown RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 POF1BQ8WVV4 589 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 PTPRN2Q92932 1015 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 PEX11GQ96HA9 241 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 MRPL4Q9BYD3 311 aaKnown RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 ALDH8A1Q9H2A2 487 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 NCOA5Q9HCD5 579 aaKnown RBP3.76□□□□□ -1.81
CSDE1-209ENST00000525132 PCDHA2Q9Y5H9 948 aa3.76□□□□□ -1.81
CSDE1-209ENST00000525132 ANK2Q01484 3957 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 EVC2Q86UK5 1308 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 LOC100653049A0A140TA62 436 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 TCRBV5S2A0A599 114 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 TCRBV5S4A2TA0A5A2 114 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 DBX1A6NMT0 343 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 CREB3O43889 395 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 KRT34O76011 436 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 RASGRP1O95267 797 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 PLA2G1BP04054 148 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 ITGB1P05556 798 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 KRT18P05783 430 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 CKMP06732 381 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 MMP3P08254 477 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 SRGAP2BP0DMP2 458 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 GRK2P25098 689 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 GRK3P35626 688 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 GNALP38405 381 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 GABREP78334 506 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 BEX3Q00994 111 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 DEFA6Q01524 100 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 KIZQ2M2Z5 673 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 BROXQ5VW32 411 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 CNNM4Q6P4Q7 775 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 LCNL1Q6ZST4 164 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 TSHZ1Q6ZSZ6 1077 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 USP53Q70EK8 1073 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 OTOP3Q7RTS5 596 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 FAM129CQ86XR2 697 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 DCP2Q8IU60 420 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 C12orf76Q8N812 135 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 MB21D1Q8N884 522 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 TTLL11Q8NHH1 800 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 PCDH19Q8TAB3 1148 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 UHMK1Q8TAS1 419 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 SH3RF2Q8TEC5 729 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 PDCD6IPQ8WUM4 868 aaKnown RBP3.75□□□□□ -1.81
CSDE1-209ENST00000525132 SEC14L1Q92503 715 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 FGF11Q92914 225 aa3.75□□□□□ -1.81
CSDE1-209ENST00000525132 DACT3Q96B18 629 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms