RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ZNF394Q53GI3 561 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 LIN9Q5TKA1 542 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 ANKRD54Q6NXT1 300 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 FMNL3Q8IVF7 1028 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 FUKQ8N0W3 1084 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 C12orf29Q8N999 325 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 CYFIP2Q96F07 1278 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 TRIM5Q9C035 493 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 CRISPLD1Q9H336 500 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 CYP4F11Q9HBI6 524 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 MAN1C1Q9NR34 630 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 CLEC1BQ9P126 229 aa18.5■□□□□ 0.55
TRAM1-203ENST00000520700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAM1-203ENST00000520700 ATP8B3O60423 1300 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 LINC01565O15544 149 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 C8AP07357 584 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 SPATA31D3P0C874 917 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 CLCN1P35523 988 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 STAT1P42224 750 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 CNGA2Q16280 664 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 SGO2Q562F6 1265 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 SPATA31D4Q6ZUB0 917 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 VSTM4Q8IW00 320 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 BAP1Q92560 729 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 MRFAP1L1Q96HT8 127 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 MSLNLQ96KJ4 702 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 PGLYRP2Q96PD5 576 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 LPIN3Q9BQK8 851 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 UBXN6Q9BZV1 441 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 SFXN1Q9H9B4 322 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 CSNK1G1Q9HCP0 422 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 COG5Q9UP83 839 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 INSL5Q9Y5Q6 135 aa18.49■□□□□ 0.55
TRAM1-203ENST00000520700 MTCL1Q9Y4B5 1905 aaKnown RBP18.49■□□□□ 0.55
TRAM1-203ENST00000520700 PRRG1O14668 218 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 KRT5P13647 590 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 CYP2F1P24903 491 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SOX5P35711 763 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 RPL10AP62906 217 aaKnown RBP18.48■□□□□ 0.55
TRAM1-203ENST00000520700 RBM10P98175 930 aaKnown RBP18.48■□□□□ 0.55
TRAM1-203ENST00000520700 CYP27A1Q02318 531 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 PTK2Q05397 1052 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 PLD1Q13393 1074 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 ORC1Q13415 861 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 CCDC142Q17RM4 750 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 PPP1R26Q5T8A7 1209 aaPredicted RBP18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SPECC1LQ69YQ0 1117 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 LLGL2Q6P1M3 1020 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SYCE2Q6PIF2 218 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 LCLAT1Q6UWP7 414 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 FAM35AQ86V20 835 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 MICALL1Q8N3F8 863 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SLC7A14Q8TBB6 771 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SLC2A14Q8TDB8 520 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 C8orf48Q96LL4 319 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SPAG5Q96R06 1193 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 PRKD2Q9BZL6 878 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 NLRC4Q9NPP4 1024 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 CLDND1Q9NY35 253 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 ABI2Q9NYB9 513 aaPredicted RBP18.48■□□□□ 0.55
TRAM1-203ENST00000520700 CAPN11Q9UMQ6 739 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 SLC27A5Q9Y2P5 690 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 ASB3Q9Y575 518 aa18.48■□□□□ 0.55
TRAM1-203ENST00000520700 O00370 1275 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 CYP26A1O43174 497 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 BDNFP23560 247 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 ZNF75DP51815 510 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 ITIH3Q06033 890 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 TRIM14Q14142 442 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 CCDC85BQ15834 202 aaPredicted RBP18.47■□□□□ 0.55
TRAM1-203ENST00000520700 PPM1LQ5SGD2 360 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 ANKRD52Q8NB46 1076 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 MAFAQ8NHW3 353 aaPredicted RBP18.47■□□□□ 0.55
TRAM1-203ENST00000520700 ZNF606Q8WXB4 792 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 TFAP2BQ92481 460 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 SMARCD1Q96GM5 515 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 SPATA17Q96L03 361 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 ZSWIM1Q9BR11 485 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 ZNF518BQ9C0D4 1074 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 NUCKS1Q9H1E3 243 aaKnown RBP18.47■□□□□ 0.55
TRAM1-203ENST00000520700 S1PR5Q9H228 398 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 YIPF1Q9Y548 306 aa18.47■□□□□ 0.55
TRAM1-203ENST00000520700 PLXNA3P51805 1871 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 TRIM66O15016 1216 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 MED7O43513 233 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 TBX10O75333 385 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 CCDC172P0C7W6 258 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 CCDC130P13994 396 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 CD19P15391 556 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 USP8P40818 1118 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 ALDH1A3P47895 512 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 PTPN21Q16825 1174 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 MGAT5BQ3V5L5 792 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 PKDCCQ504Y2 493 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
TRAM1-203ENST00000520700 SYN2Q92777 582 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms