RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 CAPZA3Q96KX2 299 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 PSMB7Q99436 277 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 HNRNPABQ99729 332 aaKnown RBP16.96■□□□□ 0.31
SNHG6-201ENST00000520348 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 TJP2Q9UDY2 1190 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 TMEM59LQ9UK28 342 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 INPP5FQ9Y2H2 1132 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 PCDHA3Q9Y5H8 950 aa16.96■□□□□ 0.31
SNHG6-201ENST00000520348 TET1Q8NFU7 2136 aa16.96■□□□□ 0.3
SNHG6-201ENST00000520348 ARHGEF37A1IGU5 675 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 HOXA2O43364 376 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 DDHD2O94830 711 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 ODC1P11926 461 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
SNHG6-201ENST00000520348 SCNN1AP37088 669 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 LBX1P52954 281 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 BST2Q10589 180 aaKnown RBP16.95■□□□□ 0.3
SNHG6-201ENST00000520348 NAA30Q147X3 362 aaPredicted RBP16.95■□□□□ 0.3
SNHG6-201ENST00000520348 KIAA0319Q5VV43 1072 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 CPNE8Q86YQ8 564 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 NOA1Q8NC60 698 aaKnown RBP16.95■□□□□ 0.3
SNHG6-201ENST00000520348 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 UBA3Q8TBC4 463 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 IPO4Q8TEX9 1081 aaKnown RBP16.95■□□□□ 0.3
SNHG6-201ENST00000520348 TSC1Q92574 1164 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 KRT35Q92764 455 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 RTP3Q9BQQ7 232 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 C11orf49Q9H6J7 331 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 FAM49BQ9NUQ9 324 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 HESX1Q9UBX0 185 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 IP6K2Q9UHH9 426 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 DSEQ9UL01 958 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 CDH9Q9ULB4 789 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 MICAL3Q7RTP6 2002 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 PCNTO95613 3336 aa16.95■□□□□ 0.3
SNHG6-201ENST00000520348 COL4A6Q14031 1691 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PSTPIP1O43586 416 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 GABBR2O75899 941 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 B3GAT3O94766 335 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PTPN1P18031 435 aaKnown RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 MARCKSL1P49006 195 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PSMC1P62191 440 aaKnown RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 RPL7AP62424 266 aaKnown RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PLCB3Q01970 1234 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PDE4CQ08493 712 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 ELF2Q15723 593 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 CYP4A22Q5TCH4 519 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 DSTYKQ6XUX3 929 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PAQR9Q6ZVX9 377 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 NPAS4Q8IUM7 802 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 FUKQ8N0W3 1084 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 GPR161Q8N6U8 529 aaKnown RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 UBL4BQ8N7F7 174 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 SCLYQ96I15 445 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 CASD1Q96PB1 797 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PKMYT1Q99640 499 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 SYT15Q9BQS2 421 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.36e-12■□□□□ 9.7
SNHG6-201ENST00000520348 SELENOOQ9BVL4 669 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 CRTAC1Q9NQ79 661 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 DDX43Q9NXZ2 648 aaKnown RBP16.94■□□□□ 0.3
SNHG6-201ENST00000520348 PCDHB8Q9UN66 801 aa16.94■□□□□ 0.3
SNHG6-201ENST00000520348 TMEM110-MUSTN1A8MSY1 372 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 PGRMC1O00264 195 aaKnown RBP16.93■□□□□ 0.3
SNHG6-201ENST00000520348 SPOPO43791 374 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 CLTBP09497 229 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 PDGFRBP09619 1106 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 CCDC130P13994 396 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 BRCC3P46736 316 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 OGDHQ02218 1023 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 PIGHQ14442 188 aaPredicted RBP16.93■□□□□ 0.3
SNHG6-201ENST00000520348 CLUL1Q15846 466 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 TEX35Q5T0J7 233 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 CCDC181Q5TID7 509 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 LRRC38Q5VT99 294 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 PMF1Q6P1K2 205 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 ZNF280BQ86YH2 543 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 ZDHHC17Q8IUH5 632 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 SLC2A14Q8TDB8 520 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 MS4A14Q96JA4 679 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 HSFY1Q96LI6 401 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 MCEEQ96PE7 176 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 LPIN3Q9BQK8 851 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 ACBD6Q9BR61 282 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
SNHG6-201ENST00000520348 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNHG6-201ENST00000520348 V9GYY5 206 aaPredicted RBP16.93■□□□□ 0.3
SNHG6-201ENST00000520348 COL4A4P53420 1690 aaPredicted RBP16.92■□□□□ 0.3
SNHG6-201ENST00000520348 E5RJQ4 531 aa16.92■□□□□ 0.3
SNHG6-201ENST00000520348 TULP2O00295 520 aa16.92■□□□□ 0.3
SNHG6-201ENST00000520348 XPO1O14980 1071 aaKnown RBP16.92■□□□□ 0.3
SNHG6-201ENST00000520348 KIAA0355O15063 1070 aa16.92■□□□□ 0.3
SNHG6-201ENST00000520348 GJB6O95452 261 aa16.92■□□□□ 0.3
SNHG6-201ENST00000520348 ITGB1P05556 798 aa16.92■□□□□ 0.3
SNHG6-201ENST00000520348 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
SNHG6-201ENST00000520348 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms