RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 TRMT2BQ96GJ1 504 aaKnown RBP9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 FUBP3Q96I24 572 aaKnown RBP eCLIP9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 ANKRD36BP1Q96IX9 119 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 FAM84AQ96KN4 292 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 MYRFLQ96LU7 910 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 MTMR12Q9C0I1 747 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 LRRC27Q9C0I9 530 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 PCIF1Q9H4Z3 704 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 PARD6AQ9NPB6 346 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 HPS4Q9NQG7 708 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 GKN1Q9NS71 199 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 TDP1Q9NUW8 608 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 INTS13Q9NVM9 706 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 C2orf42Q9NWW7 574 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 UXTQ9UBK9 157 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 GTF3C4Q9UKN8 822 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 USP18Q9UMW8 372 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 MAGED2Q9UNF1 606 aaPredicted RBP9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 CCL26Q9Y258 94 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 SNX9Q9Y5X1 595 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
CTNNA1-204ENST00000517656 ZNF233A6NK53 670 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 K7ELQ4 463 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 HRO43593 1189 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 LRP3O75074 770 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 PPP6R2O75170 966 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 ATXN1P54253 815 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 MYO1EQ12965 1108 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 RUNX3Q13761 415 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 SIM2Q14190 667 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 PDGFRLQ15198 375 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 STK38Q15208 465 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 SURF1Q15526 300 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 E2F4Q16254 413 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 LPAL2Q16609 132 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 CCDC142Q17RM4 750 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 SOWAHAQ2M3V2 549 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 TMEM196Q5HYL7 178 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 SDHAF4Q5VUM1 108 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 LMBRD2Q68DH5 695 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 TRIM68Q6AZZ1 485 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 FAM171BQ6P995 826 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 PRR23BQ6ZRT6 265 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 LIMS2Q7Z4I7 341 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 WDR5BQ86VZ2 330 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 CBWD2Q8IUF1 395 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 SPATA2LQ8IUW3 424 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 STKLD1Q8NE28 680 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 GLIS3Q8NEA6 775 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 OR5B17Q8NGF7 314 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 RIN3Q8TB24 985 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 NOC3LQ8WTT2 800 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 HPS3Q969F9 1004 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 CHFRQ96EP1 664 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 TRIM9Q9C026 710 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 CUEDC2Q9H467 287 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 EBF3Q9H4W6 596 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 KIAA1586Q9HCI6 787 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 KBTBD4Q9NVX7 518 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 HSPBP1Q9NZL4 362 aa9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 R3HCC1Q9Y3T6 440 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-204ENST00000517656 OTOL1A6NHN0 477 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 TRDMT1O14717 391 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 SPTLC2O15270 562 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 EIF3DO15371 548 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 HCRTO43612 131 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 TNNC2P02585 160 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 HOXD13P35453 343 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 MAGEA11P43364 429 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 AMPD3Q01432 767 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 AMPD2Q01433 879 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 FAM160A1Q05DH4 1040 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 SPEM2Q0P670 501 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 GRSF1Q12849 480 aaKnown RBP eCLIP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 SRSF5Q13243 272 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 MTF1Q14872 753 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 ZNF77Q15935 545 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 HEATR6Q6AI08 1181 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 FSTL4Q6MZW2 842 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 CC2D1AQ6P1N0 951 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 CNNM4Q6P4Q7 775 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 C4orf50Q6ZRC1 276 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 EPM2AIP1Q7L775 607 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 WDR49Q8IV35 697 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 ZNF507Q8TCN5 953 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 KBTBD7Q8WVZ9 684 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 HPDLQ96IR7 371 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 CEP295NLQ96MC4 621 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 ZNF396Q96N95 335 aaPredicted RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 CDH9Q9ULB4 789 aa9.03□□□□□ -0.96
CTNNA1-204ENST00000517656 KIF26AQ9ULI4 1882 aaPredicted RBP9.02□□□□□ -0.96
CTNNA1-204ENST00000517656 TRAV19A0A0A6YYK7 116 aa9.02□□□□□ -0.97
CTNNA1-204ENST00000517656 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.97
CTNNA1-204ENST00000517656 ATG13O75143 517 aa9.02□□□□□ -0.97
CTNNA1-204ENST00000517656 YEATS4O95619 227 aa9.02□□□□□ -0.97
CTNNA1-204ENST00000517656 CKMP06732 381 aa9.02□□□□□ -0.97
CTNNA1-204ENST00000517656 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms