RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 MDH1BQ5I0G3 518 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 ATAT1Q5SQI0 421 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 ARHGAP17Q68EM7 881 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 CES5AQ6NT32 575 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 PAQR9Q6ZVX9 377 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 ACOT1Q86TX2 421 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 SPATA2LQ8IUW3 424 aaPredicted RBP10.35□□□□□ -0.75
SFXN1-205ENST00000506963 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 TTC9BQ8N6N2 239 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 SLC4A11Q8NBS3 891 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 SHC3Q92529 594 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 KAT5Q92993 513 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 TMEM176AQ96HP8 235 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 RIPOR3Q96MK2 946 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 PGLYRP2Q96PD5 576 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 HNRNPABQ99729 332 aaKnown RBP10.35□□□□□ -0.75
SFXN1-205ENST00000506963 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 NAA15Q9BXJ9 866 aaKnown RBP10.35□□□□□ -0.75
SFXN1-205ENST00000506963 B3GNT5Q9BYG0 378 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 UBE2TQ9NPD8 197 aaPredicted RBP10.35□□□□□ -0.75
SFXN1-205ENST00000506963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.35□□□□□ -0.752e-6■■■■■ 96.1
SFXN1-205ENST00000506963 ABI2Q9NYB9 513 aaPredicted RBP10.35□□□□□ -0.75
SFXN1-205ENST00000506963 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 FAM50BQ9Y247 325 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 USP15Q9Y4E8 981 aaPredicted RBP10.35□□□□□ -0.75
SFXN1-205ENST00000506963 GREB1Q4ZG55 1949 aa10.35□□□□□ -0.75
SFXN1-205ENST00000506963 ATP8B3O60423 1300 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 REV3LO60673 3130 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 A0A1W2PQC6 194 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 NOL4O94818 638 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 MICAL2O94851 1124 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 LRG1P02750 347 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 UCHL3P15374 230 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 ATF6P18850 670 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 CYP2F1P24903 491 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 EPHB3P54753 998 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 TFF2Q03403 129 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 TWF1Q12792 350 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 CBX2Q14781 532 aaPredicted RBP10.34□□□□□ -0.75
SFXN1-205ENST00000506963 NR1I3Q14994 352 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 MEA1Q16626 185 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 CCDC142Q17RM4 750 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 FILIP1LQ4L180 1135 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 RARS2Q5T160 578 aaKnown RBP10.34□□□□□ -0.75
SFXN1-205ENST00000506963 KLHDC7AQ5VTJ3 777 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 TMC5Q6UXY8 1006 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 EP400NLQ6ZTU2 488 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 RRAGAQ7L523 313 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 FAM35AQ86V20 835 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 C12orf76Q8N812 135 aaPredicted RBP10.34□□□□□ -0.75
SFXN1-205ENST00000506963 LEMD2Q8NC56 503 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 SMG7Q92540 1137 aaKnown RBP10.34□□□□□ -0.75
SFXN1-205ENST00000506963 PSMG2Q969U7 264 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 SMARCD1Q96GM5 515 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 SPATA17Q96L03 361 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 C8orf48Q96LL4 319 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 ASB2Q96Q27 587 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 LRRC3Q9BY71 257 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 GANQ9H2C0 597 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 CSNK1G1Q9HCP0 422 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 WDR6Q9NNW5 1121 aaKnown RBP10.34□□□□□ -0.75
SFXN1-205ENST00000506963 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 DOCK8Q8NF50 2099 aa10.34□□□□□ -0.75
SFXN1-205ENST00000506963 PATJQ8NI35 1801 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 PES1O00541 588 aaKnown RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 TRIM66O15016 1216 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 VDRP11473 427 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 BMP1P13497 986 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 PTPN2P17706 415 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 ALDH1A3P47895 512 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 FANCCQ00597 558 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 APBA1Q02410 837 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 UBXN1Q04323 297 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 SYCP1Q15431 976 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 MGAT5BQ3V5L5 792 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 IQCEQ6IPM2 695 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 GJB7Q6PEY0 223 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 TMEM270Q6UE05 265 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 ITIH5Q86UX2 942 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 C12orf29Q8N999 325 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 RBBP8NLQ8NC74 664 aaPredicted RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 SLC2A14Q8TDB8 520 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 CYFIP2Q96F07 1278 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 TRMT2BQ96GJ1 504 aaKnown RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 MYRFLQ96LU7 910 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 NAP1L5Q96NT1 182 aaPredicted RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 SEPT5Q99719 369 aaPredicted RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 LPIN3Q9BQK8 851 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 STK33Q9BYT3 514 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 UBXN6Q9BZV1 441 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 ZNF518BQ9C0D4 1074 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 GPR88Q9GZN0 384 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 PNPLA8Q9NP80 782 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 DNMT3BQ9UBC3 853 aaKnown RBP10.33□□□□□ -0.76
SFXN1-205ENST00000506963 PRKAG3Q9UGI9 489 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 DNAJC12Q9UKB3 198 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 USTQ9Y2C2 406 aa10.33□□□□□ -0.76
SFXN1-205ENST00000506963 PCDHB4Q9Y5E5 795 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms