RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ZMYND10O75800 440 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 RASSF9O75901 435 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 ATG7O95352 703 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 GALTP07902 379 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 LIMK1P53667 647 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 GPC5P78333 572 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 GUCY2DQ02846 1103 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 PDCLQ13371 301 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 RPS6KA1Q15418 735 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 ASIC2Q16515 512 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 CALCRLQ16602 461 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 HEATR3Q7Z4Q2 680 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 TRIM59Q8IWR1 403 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 RASGEF1CQ8N431 466 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 CCHCR1Q8TD31 782 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 HDAC7Q8WUI4 952 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 RUNDC3BQ96NL0 473 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 CCT8L2Q96SF2 557 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 NELL2Q99435 816 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 LTB4R2Q9NPC1 389 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 MAN1C1Q9NR34 630 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 FAM207AQ9NSI2 230 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 SUCLA2Q9P2R7 463 aaPredicted RBP11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 SLC12A6Q9UHW9 1150 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 RAB23Q9ULC3 237 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 NFASCO94856 1347 aa11.3□□□□□ -0.6
PDLIM1-205ENST00000493949 ZBTB42B2RXF5 422 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 INPPL1O15357 1258 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 GDF9O60383 454 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 CCNT1O60563 726 aaKnown RBP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 DNAJC8O75937 253 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 KIF4AO95239 1232 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 C1RP00736 705 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 NRLP54845 237 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 ACTR2P61160 394 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 PPP2R2AP63151 447 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 FZD5Q13467 585 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 SLC44A4Q53GD3 710 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 ZNF484Q5JVG2 852 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 SLFN11Q7Z7L1 901 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 CACNA2D3Q8IZS8 1091 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 SMG7Q92540 1137 aaKnown RBP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 CYFIP2Q96F07 1278 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 SGSM3Q96HU1 749 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 ZNF668Q96K58 619 aaPredicted RBP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 PLCD4Q9BRC7 762 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 MMTAG2Q9BU76 263 aaKnown RBP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 NRDE2Q9H7Z3 1164 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 METTL14Q9HCE5 456 aaKnown RBP11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 KLC4Q9NSK0 619 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 BLOC1S4Q9NUP1 217 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 PLAAQ9Y263 795 aa11.29□□□□□ -0.6
PDLIM1-205ENST00000493949 LOC400499M0QZD8 3231 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 BPTFQ12830 3046 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 SMG1Q96Q15 3661 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 A0A1B0GUA9 196 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CFAP73A6NFT4 308 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 NCAM2O15394 837 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 SLC16A3O15427 465 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 PALMO75781 387 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 GLI1P08151 1106 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 PLEKP08567 350 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 KLK7P49862 253 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 DRG2P55039 364 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 KLHL30Q0D2K2 578 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 XRCC4Q13426 336 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 ITIH4Q14624 930 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 SNCBQ16143 134 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 GKAP1Q5VSY0 366 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 TSSK4Q6SA08 328 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 MOXD1Q6UVY6 613 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CRELD2Q6UXH1 353 aaPredicted RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 UNQ6494/PRO21346Q6UXR6 183 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 TRMT1LQ7Z2T5 733 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CCDC13Q8IYE1 715 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 ANKS4BQ8N8V4 417 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CUL5Q93034 780 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 RPP25Q9BUL9 199 aaKnown RBP11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 ADAMTS10Q9H324 1103 aa11.28□□□□□ -0.6
PDLIM1-205ENST00000493949 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms