RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 DCLK2Q8N568 766 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 MAB21L3Q8N8X9 362 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 OR5B17Q8NGF7 314 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 USP13Q92995 863 aaPredicted RBP17.49■□□□□ 0.39
C9orf78-206ENST00000492991 DHX58Q96C10 678 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 NCDNQ9UBB6 729 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 CDH9Q9ULB4 789 aa17.49■□□□□ 0.39
C9orf78-206ENST00000492991 PVALEFA0A1B0GWK0 134 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 TGFB1I1O43294 461 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 ZSCAN22P10073 491 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-206ENST00000492991 CYP2F1P24903 491 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 SOX9P48436 509 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 AMPD2Q01433 879 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 PUM1Q14671 1186 aaKnown RBP eCLIP17.48■□□□□ 0.392e-28■■□□□ 12.6
C9orf78-206ENST00000492991 DDR2Q16832 855 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 SCARA3Q6AZY7 606 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 VSTM1Q6UX27 236 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 TRAPPC11Q7Z392 1133 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 OSTM1Q86WC4 334 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 SPATA2LQ8IUW3 424 aaPredicted RBP17.48■□□□□ 0.39
C9orf78-206ENST00000492991 C12orf56Q8IXR9 622 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 RMDN1Q96DB5 314 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 ZFYVE19Q96K21 471 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 SPATA17Q96L03 361 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 AGPAT3Q9NRZ7 376 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 DLL3Q9NYJ7 618 aa17.48■□□□□ 0.39
C9orf78-206ENST00000492991 PTPRJQ12913 1337 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 PFKLP17858 780 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 WARSP23381 471 aaKnown RBP17.47■□□□□ 0.39
C9orf78-206ENST00000492991 ACAT1P24752 427 aaKnown RBP17.47■□□□□ 0.39
C9orf78-206ENST00000492991 GPR15P49685 360 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 SATB1Q01826 763 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 TNK2Q07912 1038 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 RUNX3Q13761 415 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 PSMD6Q15008 389 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 PDGFRLQ15198 375 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 SNRNP35Q16560 246 aaKnown RBP17.47■□□□□ 0.39
C9orf78-206ENST00000492991 BMT2Q1RMZ1 405 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 WDR44Q5JSH3 913 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 TXNDC8Q6A555 127 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 HS2ST1Q7LGA3 356 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 NOC3LQ8WTT2 800 aaKnown RBP17.47■□□□□ 0.39
C9orf78-206ENST00000492991 SCFD1Q8WVM8 642 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 KBTBD7Q8WVZ9 684 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 FAM13BQ9NYF5 915 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 MAGEC2Q9UBF1 373 aaPredicted RBP17.47■□□□□ 0.39
C9orf78-206ENST00000492991 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
C9orf78-206ENST00000492991 K7ESF4 209 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 TRDMT1O14717 391 aaKnown RBP17.46■□□□□ 0.39
C9orf78-206ENST00000492991 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
C9orf78-206ENST00000492991 TACC1O75410 805 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 STAU1O95793 577 aaKnown RBP17.46■□□□□ 0.39
C9orf78-206ENST00000492991 TCF3P15923 654 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 CDR1P51861 262 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 PON2Q15165 354 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 TMEM196Q5HYL7 178 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 LAIR1Q6GTX8 287 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 KIAA1958Q8N8K9 716 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 FSIP1Q8NA03 581 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 XXYLT1Q8NBI6 393 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 TMEM174Q8WUU8 243 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 EXOC4Q96A65 974 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 FNBP1Q96RU3 617 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 SYT15Q9BQS2 421 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 SMG9Q9H0W8 520 aaKnown RBP17.46■□□□□ 0.39
C9orf78-206ENST00000492991 HPS4Q9NQG7 708 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 RBM12Q9NTZ6 932 aaKnown RBP17.46■□□□□ 0.39
C9orf78-206ENST00000492991 RAB23Q9ULC3 237 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 MAGED2Q9UNF1 606 aaPredicted RBP17.46■□□□□ 0.39
C9orf78-206ENST00000492991 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
C9orf78-206ENST00000492991 DMXL1Q9Y485 3027 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 DENND4CQ5VZ89 1909 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 PRR5-ARHGAP8B1AHC4 643 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 TULP1O00294 542 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-206ENST00000492991 LRP3O75074 770 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 TADA3O75528 432 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 F13A1P00488 732 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 USP17L7P0C7H9 530 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 TGM1P22735 817 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 LMO2P25791 158 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 PDE6CP51160 858 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 ARHGAP8P85298 464 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 FAM160A1Q05DH4 1040 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 CYP24A1Q07973 514 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 LMBRD2Q68DH5 695 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-206ENST00000492991 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-206ENST00000492991 LONP2Q86WA8 852 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 FAM84AQ96KN4 292 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 CGRRF1Q99675 332 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 EHD2Q9NZN4 543 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 GMEB2Q9UKD1 530 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 RCOR1Q9UKL0 485 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 PCDHA7Q9UN72 937 aa17.45■□□□□ 0.38
C9orf78-206ENST00000492991 KIF26AQ9ULI4 1882 aaPredicted RBP17.44■□□□□ 0.38
C9orf78-206ENST00000492991 TRAV19A0A0A6YYK7 116 aa17.44■□□□□ 0.38
C9orf78-206ENST00000492991 CCDC163A0A0D9SF12 145 aa17.44■□□□□ 0.38
C9orf78-206ENST00000492991 ATG13O75143 517 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms