RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 AAMPQ13685 434 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 RNF20Q5VTR2 975 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 Q6ZUG5 572 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 KRT25Q7Z3Z0 450 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 NEK8Q86SG6 692 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 DEFB119Q8N690 84 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 DEPTORQ8TB45 409 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 AIFM3Q96NN9 605 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 ECT2Q9H8V3 914 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 TOPORSQ9NS56 1045 aaPredicted RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 GMPR2Q9P2T1 348 aaKnown RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 PTPN13Q12923 2485 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 K7EQS6 105 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 M0QZQ0 153 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 LARGE1O95461 756 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 SERPINF2P08697 491 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 GCFC2P16383 781 aaKnown RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 ATF6P18850 670 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 ATP2B1P20020 1258 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CDC25CP30307 473 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 NMT1P30419 496 aaKnown RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CCT2P78371 535 aaKnown RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 BFSP1Q12934 665 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 PDGFRLQ15198 375 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CRY1Q16526 586 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 DUOXA1Q1HG43 343 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 MAP7D1Q3KQU3 841 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CC2D1AQ6P1N0 951 aaPredicted RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TREML4Q6UXN2 200 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TOGARAM2Q6ZUX3 1019 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TMEM150AQ86TG1 271 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 ITIH5Q86UX2 942 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CPA6Q8N4T0 437 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 MAB21L3Q8N8X9 362 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 MCPH1Q8NEM0 835 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 PIP4K2CQ8TBX8 421 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 GCNAQ96QF7 691 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CCDC94Q9BW85 323 aaPredicted RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CDT1Q9H211 546 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 POLD4Q9HCU8 107 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TDP1Q9NUW8 608 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 DNAAF2Q9NVR5 837 aaKnown RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 MMP17Q9ULZ9 603 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 PCDHB9Q9Y5E1 797 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 KNTC1P50748 2209 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TRABD2BA6NFA1 517 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 OR6C75A6NL08 312 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 J3QKU1 62 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 GJB3O75712 270 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 HOXD12P35452 270 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 AVPR1AP37288 418 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 DPP6P42658 865 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 NAMPTP43490 491 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 USP46P62068 366 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 NAXDQ8IW45 347 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 SLFN12Q8IYM2 578 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CEP76Q8TAP6 659 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 GIPC2Q8TF65 315 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 EXOC4Q96A65 974 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 SPACA7Q96KW9 195 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 SEPT5Q99719 369 aaPredicted RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 POLMQ9NP87 494 aaPredicted RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 CNTN3Q9P232 1028 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 KCNJ14Q9UNX9 436 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 APOBEC2Q9Y235 224 aaKnown RBP9.99□□□□□ -0.81
SSBP1-212ENST00000489378 TNFSF13BQ9Y275 285 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 WNT6Q9Y6F9 365 aa9.99□□□□□ -0.81
SSBP1-212ENST00000489378 OBSL1O75147 1896 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 COL6A6A6NMZ7 2263 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
SSBP1-212ENST00000489378 XRCC6P12956 609 aaKnown RBP eCLIP9.98□□□□□ -0.81
SSBP1-212ENST00000489378 ITPKBP27987 946 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 HSPA4P34932 840 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 ABCG1P45844 678 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 ZNF568Q3ZCX4 644 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 SPDYCQ5MJ68 293 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 TXNDC8Q6A555 127 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 GALNT17Q6IS24 598 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 TMPRSS7Q7RTY8 843 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
SSBP1-212ENST00000489378 SFTPA1Q8IWL2 248 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
SSBP1-212ENST00000489378 WHAMMQ8TF30 809 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 PRORYQ9H606 182 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 PTPRHQ9HD43 1115 aa9.98□□□□□ -0.81
SSBP1-212ENST00000489378 DUS2Q9NX74 493 aaKnown RBP9.98□□□□□ -0.81
SSBP1-212ENST00000489378 PIEZO2Q9H5I5 2752 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 USP9XQ93008 2570 aaPredicted RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 ARHGAP6O43182 974 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 CBFA2T3O75081 653 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 ALDH1A2O94788 518 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 BAG4O95429 457 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 F11P03951 625 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 SPATA31C1P0DKV0 1188 aa9.97□□□□□ -0.81
SSBP1-212ENST00000489378 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
SSBP1-212ENST00000489378 OPRD1P41143 372 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms