RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 DSEQ9UL01 958 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 PCDHB6Q9Y5E3 794 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 STK24Q9Y6E0 443 aa16.1■□□□□ 0.17
PFDN4-204ENST00000487129 NPHP3-ACAD11A0A0J9YXS1 232 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 SPAARA0A1B0GVQ0 90 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 FAM221BA6H8Z2 402 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 CYB561D2O14569 222 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 PTGER3P43115 390 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 MATR3P43243 847 aaKnown RBP eCLIP16.09■□□□□ 0.17
PFDN4-204ENST00000487129 SMTNP53814 917 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 ZXDBP98169 803 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 SEMA3BQ13214 749 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 TAF12Q16514 161 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 KYAT1Q16773 422 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 TRIM61Q5EBN2 209 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 ARSHQ5FYA8 562 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 TMEM92Q6UXU6 159 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 SFTPA1Q8IWL2 248 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 FRMD1Q8N878 549 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 PIGKQ92643 395 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 MRPS31Q92665 395 aaKnown RBP16.09■□□□□ 0.17
PFDN4-204ENST00000487129 ATP2A3Q93084 1043 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 MYRFLQ96LU7 910 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
PFDN4-204ENST00000487129 LINC00597Q9H2U6 94 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 GCNT4Q9P109 453 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 MMP17Q9ULZ9 603 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 DERAQ9Y315 318 aa16.09■□□□□ 0.17
PFDN4-204ENST00000487129 IGSF10Q6WRI0 2623 aa16.08■□□□□ 0.17
PFDN4-204ENST00000487129 ZNF638Q14966 1978 aaKnown RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 UPK3BL1B0FP48 263 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 UPK3BL2E5RIL1 263 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 NOL4O94818 638 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 CSH1P0DML2 217 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 CSH2P0DML3 217 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 P2RY2P41231 377 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 DHPSP49366 369 aaPredicted RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 LIG4P49917 911 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 FAM193AP78312 1265 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 MESP2Q0VG99 397 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 PSMD2Q13200 908 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 CRY1Q16526 586 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 CCDC142Q17RM4 750 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 ZC2HC1CQ53FD0 456 aaPredicted RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 C2orf27AQ580R0 203 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 CD302Q8IX05 232 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 RLN3Q8WXF3 142 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 BICD1Q96G01 975 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 TRMT2BQ96GJ1 504 aaKnown RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 PKMYT1Q99640 499 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 TMEM206Q9H813 350 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 MBD1Q9UIS9 605 aaPredicted RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 KCNG1Q9UIX4 513 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 MAGED2Q9UNF1 606 aaPredicted RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 PCDHB5Q9Y5E4 795 aa16.08■□□□□ 0.16
PFDN4-204ENST00000487129 GCN1Q92616 2671 aaKnown RBP16.08■□□□□ 0.16
PFDN4-204ENST00000487129 MYH11P35749 1972 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 TNFRSF10BO14763 440 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 TCF3P15923 654 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 ENGP17813 658 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 PRPHP41219 470 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 TAF6P49848 677 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 SEC13P55735 322 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 LMAN2Q12907 356 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 PEAR1Q5VY43 1037 aaPredicted RBP16.07■□□□□ 0.16
PFDN4-204ENST00000487129 PROSER1Q86XN7 944 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 LRRC15Q8TF66 581 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
PFDN4-204ENST00000487129 EXOC4Q96A65 974 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 FAM212AQ96EL1 285 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 FIZ1Q96SL8 496 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 RAB34Q9BZG1 259 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 KCND2Q9NZV8 630 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 C2CD2Q9Y426 696 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 GPSM3Q9Y4H4 160 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 CELSR3Q9NYQ7 3312 aa16.07■□□□□ 0.16
PFDN4-204ENST00000487129 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 C2orf78A6NCI8 922 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 TISP43B9A030 160 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 MAPK8P45983 427 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 IFNAR2P48551 515 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 SIM1P81133 766 aaPredicted RBP16.06■□□□□ 0.16
PFDN4-204ENST00000487129 DDR2Q16832 855 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 SOWAHCQ53LP3 525 aaPredicted RBP16.06■□□□□ 0.16
PFDN4-204ENST00000487129 SCARA3Q6AZY7 606 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 SLC23A3Q6PIS1 610 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 METTL23Q86XA0 190 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 TMEFF1Q8IYR6 380 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 DCP1BQ8IZD4 617 aaKnown RBP16.06■□□□□ 0.16
PFDN4-204ENST00000487129 THEM5Q8N1Q8 247 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 ARL14EPQ8N8R7 260 aaPredicted RBP16.06■□□□□ 0.16
PFDN4-204ENST00000487129 SH3RF2Q8TEC5 729 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 MSTO1Q9BUK6 570 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 ASB7Q9H672 318 aa16.06■□□□□ 0.16
PFDN4-204ENST00000487129 FSCN3Q9NQT6 498 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms