RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 PARM1Q6UWI2 310 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 ALKAL1Q6UXT8 129 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 C1orf186Q6ZWK4 172 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 DTWD2Q8NBA8 298 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 C18orf25Q96B23 403 aaPredicted RBP8.11□□□□□ -1.11
CLRN1-206ENST00000485607 ZBTB45Q96K62 511 aaPredicted RBP8.11□□□□□ -1.11
CLRN1-206ENST00000485607 SNX27Q96L92 541 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 PLIN2Q99541 437 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 TBC1D17Q9HA65 648 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 ABI2Q9NYB9 513 aaPredicted RBP8.11□□□□□ -1.11
CLRN1-206ENST00000485607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLRN1-206ENST00000485607 WNT16Q9UBV4 365 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 POLIQ9UNA4 740 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
CLRN1-206ENST00000485607 CDY1Q9Y6F8 540 aa8.11□□□□□ -1.11
CLRN1-206ENST00000485607 GVINP1Q7Z2Y8 2422 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 VWA8A3KMH1 1905 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 NPHP3-ACAD11A0A0J9YXS1 232 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 LRRN2O75325 713 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 HNRNPA1P09651 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLRN1-206ENST00000485607 PRPHP41219 470 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 GPC5P78333 572 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ATP2C1P98194 919 aaPredicted RBP8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ROR1Q01973 937 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ELAVL2Q12926 359 aaKnown RBP8.1□□□□□ -1.11
CLRN1-206ENST00000485607 DMP1Q13316 513 aaPredicted RBP8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ANGPT1Q15389 498 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 SLC5A9Q2M3M2 681 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 KRT79Q5XKE5 535 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 DCLRE1AQ6PJP8 1040 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ADAMTSL4Q6UY14 1074 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 DTHD1Q6ZMT9 781 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 LRRC15Q8TF66 581 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ING5Q8WYH8 240 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 FGF13Q92913 245 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 MRPL4Q9BYD3 311 aaKnown RBP8.1□□□□□ -1.11
CLRN1-206ENST00000485607 FOXQ1Q9C009 403 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 IRF2BPLQ9H1B7 796 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 KMT5AQ9NQR1 393 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ARHGEF3Q9NR81 526 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ANKFY1Q9P2R3 1169 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 DNMT3BQ9UBC3 853 aaKnown RBP8.1□□□□□ -1.11
CLRN1-206ENST00000485607 CDH7Q9ULB5 785 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 DNM3Q9UQ16 869 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 ZNF292O60281 2723 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 DOCK8Q8NF50 2099 aa8.1□□□□□ -1.11
CLRN1-206ENST00000485607 WDR27A2RRH5 827 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 VWA3AA6NCI4 1184 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 H3BRJ5 948 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 LAD1O00515 517 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 PODXLO00592 558 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 DCNP07585 359 aaKnown RBP8.09□□□□□ -1.11
CLRN1-206ENST00000485607 MCF2P10911 925 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 GLULP15104 373 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 KCNE1P15382 129 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 GUCY2CP25092 1073 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 HOXA9P31269 272 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 ARL4DP49703 201 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 YARSP54577 528 aaKnown RBP8.09□□□□□ -1.11
CLRN1-206ENST00000485607 SLC12A3P55017 1021 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 SPAG1Q07617 926 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 SPECC1Q5M775 1068 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 PDXDC1Q6P996 788 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 MPZL3Q6UWV2 235 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 TMEM161BQ8NDZ6 487 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 NXPE3Q969Y0 559 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 TMX3Q96JJ7 454 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 DRC1Q96MC2 740 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 UROC1Q96N76 676 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 KXD1Q9BQD3 176 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 CCDC94Q9BW85 323 aaPredicted RBP8.09□□□□□ -1.11
CLRN1-206ENST00000485607 OSBPL1AQ9BXW6 950 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 RAB34Q9BZG1 259 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 HAPLN2Q9GZV7 340 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 SLC2A4RGQ9NR83 387 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 TOPORSQ9NS56 1045 aaPredicted RBP8.09□□□□□ -1.11
CLRN1-206ENST00000485607 DLGAP2Q9P1A6 1054 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 CNTN3Q9P232 1028 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 TUBGCP4Q9UGJ1 667 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 BACE2Q9Y5Z0 518 aa8.09□□□□□ -1.11
CLRN1-206ENST00000485607 SPTBN4Q9H254 2564 aa8.09□□□□□ -1.12
CLRN1-206ENST00000485607 RIF1Q5UIP0 2472 aaKnown RBP8.08□□□□□ -1.12
CLRN1-206ENST00000485607 DCHS1Q96JQ0 3298 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 TM4SF5O14894 197 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 TBC1D4O60343 1298 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 SEC24AO95486 1093 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 POU2F2P09086 479 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 PLA2G4BP0C869 781 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 CXCL8P10145 99 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 PLS3P13797 630 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 CEBPBP17676 345 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
CLRN1-206ENST00000485607 GJB2P29033 226 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 ARPP19P56211 112 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 GRIN1Q05586 938 aa8.08□□□□□ -1.12
CLRN1-206ENST00000485607 RABEP1Q15276 862 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms