RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 MBOAT7Q96N66 472 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 MXRA8Q9BRK3 442 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 TRMT61BQ9BVS5 477 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 GCOM2Q9BZD3 368 aaPredicted RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 TNKS2Q9H2K2 1166 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PSTPIP2Q9H939 334 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 RSAD1Q9HA92 442 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 AGO4Q9HCK5 861 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 CHST7Q9NS84 486 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 IGSF5Q9NSI5 407 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 FNIP2Q9P278 1114 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 DNMT3BQ9UBC3 853 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 FBXW11Q9UKB1 542 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PCDHA6Q9UN73 950 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 CEP131Q9UPN4 1083 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 MRPS23Q9Y3D9 190 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PCDHB2Q9Y5E7 798 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PCDHA8Q9Y5H6 950 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 SMG1Q96Q15 3661 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 F5P12259 2224 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 MTCL1Q9Y4B5 1905 aaKnown RBP5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SPAARA0A1B0GVQ0 90 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 LNP1A1A4G5 178 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 LRIG2O94898 1065 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SLITRK5O94991 958 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 CAVIN2O95810 425 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 EFEMP2O95967 443 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 PLA2G2AP14555 144 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 MX1P20591 662 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SFPQP23246 707 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTPN4-210ENST00000485247 GDI1P31150 447 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 HOXA6P31267 233 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 NT5C2P49902 561 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 RAB27AP51159 221 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 NMIQ13287 307 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-210ENST00000485247 DRP2Q13474 957 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 LRRC32Q14392 662 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 PLCL1Q15111 1095 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SEC23AQ15436 765 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SLC5A9Q2M3M2 681 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 USP41Q3LFD5 358 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 MIS18BP1Q6P0N0 1132 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SPACA3Q8IXA5 215 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 COLGALT2Q8IYK4 626 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 CHCHD4Q8N4Q1 142 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 SLC7A14Q8TBB6 771 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF507Q8TCN5 953 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 EVI5LQ96CN4 794 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 HNRNPABQ99729 332 aaKnown RBP5.97□□□□□ -1.45
PTPN4-210ENST00000485247 GPR62Q9BZJ7 368 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 KRT23Q9C075 422 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 WNT10AQ9GZT5 417 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 LY9Q9HBG7 655 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 ZFP14Q9HCL3 533 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF334Q9HCZ1 680 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-210ENST00000485247 TMEM9BQ9NQ34 198 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 GDE1Q9NZC3 331 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 ADAMTS6Q9UKP5 1117 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 VAV3Q9UKW4 847 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 KCNH3Q9ULD8 1083 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
PTPN4-210ENST00000485247 A0A087WZ62 844 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 SLC38A8A6NNN8 435 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 GFRA2O00451 464 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 CDX4O14627 284 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 EXTL3O43909 919 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 C1QL1O75973 258 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 CEBPBP17676 345 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 PSMC3P17980 439 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 TFE3P19532 575 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 FUT4P22083 530 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 FCARP24071 287 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 HOXA9P31269 272 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 SOX9P48436 509 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 SIM1P81133 766 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 PSMD2Q13200 908 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 PLK5Q496M5 336 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 CEP55Q53EZ4 464 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 FAM78AQ5JUQ0 283 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 AXDND1Q5T1B0 1012 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 FUT10Q6P4F1 479 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 VITQ6UXI7 678 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 CATSPER4Q7RTX7 472 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 HDXQ7Z353 690 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF605Q86T29 641 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 KRTAP1-3Q8IUG1 177 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 KCT2Q8NC54 265 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 RABGGTAQ92696 567 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 RRP36Q96EU6 259 aaKnown RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 PGBD1Q96JS3 809 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 ZC3H10Q96K80 434 aaKnown RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 HRASLS5Q96KN8 279 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 CLSTN3Q9BQT9 956 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 FDXACB1Q9BRP7 624 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 COLEC11Q9BWP8 271 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 SLC32A1Q9H598 525 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 DCTPP1Q9H773 170 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms