RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 CDH9Q9ULB4 789 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 MYO16Q9Y6X6 1858 aa10.63□□□□□ -0.71
PTPN7-208ENST00000476061 PTPRZ1P23471 2315 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-208ENST00000476061 F5P12259 2224 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 RALGAPA1Q6GYQ0 2036 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 CCDC163A0A0D9SF12 145 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 PVALEFA0A1B0GWK0 134 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 PRR5-ARHGAP8B1AHC4 643 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 K7ESF4 209 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 TRDMT1O14717 391 aaKnown RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 TGFB1I1O43294 461 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 LRP3O75074 770 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 STAU1O95793 577 aaKnown RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 TCF3P15923 654 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 WARSP23381 471 aaKnown RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 ACAT1P24752 427 aaKnown RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 CYP2F1P24903 491 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 HOXD13P35453 343 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 GPR15P49685 360 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 ARHGAP8P85298 464 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 FAM160A1Q05DH4 1040 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 TMEM196Q5HYL7 178 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 FAM26FQ5R3K3 315 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 SCARA3Q6AZY7 606 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 LAIR1Q6GTX8 287 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 VSTM1Q6UX27 236 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 UNC13DQ70J99 1090 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 LONP2Q86WA8 852 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 OSTM1Q86WC4 334 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 CBWD2Q8IUF1 395 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 GPIHBP1Q8IV16 184 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 C12orf56Q8IXR9 622 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 FSIP1Q8NA03 581 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 GLIS3Q8NEA6 775 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 OR5B17Q8NGF7 314 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 EXOC4Q96A65 974 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 DHX58Q96C10 678 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 HPDLQ96IR7 371 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 SPATA17Q96L03 361 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 EHD2Q9NZN4 543 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 TFIP11Q9UBB9 837 aaKnown RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 GMEB2Q9UKD1 530 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 RAB23Q9ULC3 237 aa10.62□□□□□ -0.71
PTPN7-208ENST00000476061 MAGED2Q9UNF1 606 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 RIF1Q5UIP0 2472 aaKnown RBP10.62□□□□□ -0.71
PTPN7-208ENST00000476061 PTPRJQ12913 1337 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 EML5Q05BV3 1969 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 OTOGLQ3ZCN5 2332 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 ATG13O75143 517 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TACC1O75410 805 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TADA3O75528 432 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 USP17L7P0C7H9 530 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TGM1P22735 817 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 PDE6CP51160 858 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 ASIC1P78348 528 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 LMNB2Q03252 620 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TNK2Q07912 1038 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 PSMD6Q15008 389 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 PON2Q15165 354 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 PDGFRLQ15198 375 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 SNRNP35Q16560 246 aaKnown RBP10.61□□□□□ -0.71
PTPN7-208ENST00000476061 DDR2Q16832 855 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 BMT2Q1RMZ1 405 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TXNDC8Q6A555 127 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 CC2D1AQ6P1N0 951 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TRAPPC11Q7Z392 1133 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 DGLUCYQ7Z3D6 616 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 KIAA1958Q8N8K9 716 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 XXYLT1Q8NBI6 393 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TMEM174Q8WUU8 243 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 KBTBD7Q8WVZ9 684 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 HPS3Q969F9 1004 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 SMG9Q9H0W8 520 aaKnown RBP10.61□□□□□ -0.71
PTPN7-208ENST00000476061 HPS4Q9NQG7 708 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 AGPAT3Q9NRZ7 376 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 RBM12Q9NTZ6 932 aaKnown RBP10.61□□□□□ -0.71
PTPN7-208ENST00000476061 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-208ENST00000476061 CFAP45Q9UL16 551 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 CCL26Q9Y258 94 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 DMDP11532 3685 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 CFAP54Q96N23 3096 aa10.61□□□□□ -0.71
PTPN7-208ENST00000476061 TRAV19A0A0A6YYK7 116 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 CHURC1-FNTBB4DL54 471 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 FOXD2O60548 495 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-208ENST00000476061 F13A1P00488 732 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 CST3P01034 146 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-208ENST00000476061 RETP07949 1114 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 ZSCAN22P10073 491 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-208ENST00000476061 TNNI1P19237 187 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 DRD1P21728 446 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 LMO2P25791 158 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 PPP3CCP48454 512 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 CDR1P51861 262 aa10.6□□□□□ -0.71
PTPN7-208ENST00000476061 GRSF1Q12849 480 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTPN7-208ENST00000476061 SIM2Q14190 667 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-208ENST00000476061 MTF1Q14872 753 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms