RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CPA4Q9UI42 421 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 DMTF1Q9Y222 760 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 ZDHHC9Q9Y397 364 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 UBR2Q8IWV8 1755 aa2.79□□□□□ -1.96
CALD1-216ENST00000473714 EDC4Q6P2E9 1401 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 EVC2Q86UK5 1308 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CNOT1A5YKK6 2376 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 NUP98P52948 1817 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ECM29Q5VYK3 1845 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 PRSS38A1L453 326 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CFAP69A5D8W1 941 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 TRIM43BA6NCK2 446 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 FAM90A27PA6NNH2 459 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 BTBD19C9JJ37 291 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 F5H423 210 aaPredicted RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 WNT10BO00744 389 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 C4BPAP04003 597 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 HMGCRP04035 888 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 POU2F2P09086 479 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CETPP11597 493 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 GSPT1P15170 499 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 ZNF28P17035 718 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 C5AR1P21730 350 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CACNB3P54284 484 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 NRG3P56975 720 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 RIPPLY3P57055 190 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 FAM193AP78312 1265 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 DGCR2P98153 550 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 PPARAQ07869 468 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 RAPGEF1Q13905 1077 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 RALBP1Q15311 655 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CATSPEREQ5SY80 951 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 PPP4R3AQ6IN85 833 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 FSTL4Q6MZW2 842 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 USP45Q70EL2 814 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 GLCCI1Q86VQ1 547 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 SKAP1Q86WV1 359 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 APOBEC3FQ8IUX4 373 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 DENND1CQ8IV53 801 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 SMAP1Q8IYB5 467 aaPredicted RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 CPXCR1Q8N123 301 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ANKRD42Q8N9B4 389 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 FAM156AQ8NDB6 213 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 OR14C36Q8NHC7 312 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 SH3RF2Q8TEC5 729 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CLEC4DQ8WXI8 215 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ASB15Q8WXK1 588 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 HPS3Q969F9 1004 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 TRIM43Q96BQ3 446 aaPredicted RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 MVB12AQ96EY5 273 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 MAML3Q96JK9 1138 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 CCDC138Q96M89 665 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 YTHDC1Q96MU7 727 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 TAAR9Q96RI9 348 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 STRBPQ96SI9 672 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 AGAP2Q99490 1192 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ACO2Q99798 780 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 GTPBP4Q9BZE4 634 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 SENP6Q9GZR1 1112 aaPredicted RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 UBA5Q9GZZ9 404 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 SLC12A5Q9H2X9 1139 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 KCTD10Q9H3F6 313 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ARFGAP3Q9NP61 516 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 NGRNQ9NPE2 291 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 UCKL1Q9NWZ5 548 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ASH2LQ9UBL3 628 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 ANGPTL2Q9UKU9 493 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 LRCH1Q9Y2L9 728 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 PCDHGB6Q9Y5F9 930 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 DMRT1Q9Y5R6 373 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 SNX13Q9Y5W8 968 aa2.78□□□□□ -1.96
CALD1-216ENST00000473714 SMG1Q96Q15 3661 aaKnown RBP2.78□□□□□ -1.96
CALD1-216ENST00000473714 SPEGQ15772 3267 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 COL4A1P02462 1669 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.77□□□□□ -1.97
CALD1-216ENST00000473714 FAM227AF5H4B4 570 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 GOLIM4O00461 696 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 TPP1O14773 563 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 ECE2O60344 883 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 NRP2O60462 931 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 RAMP2O60895 175 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 TCEA3O75764 348 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 CYP7B1O75881 506 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 BBOX1O75936 387 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 STARD3NLO95772 234 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 SETSIPP0DME0 302 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 RHCEP18577 417 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 HTR1BP28222 390 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 SDHAP31040 664 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 STAT5AP42229 794 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 SLC6A11P48066 632 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 TRAPPC10P48553 1259 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 EPHA5P54756 1037 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 MANFP55145 182 aaKnown RBP2.77□□□□□ -1.97
CALD1-216ENST00000473714 HERVK_113P62684 666 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 MRPS21P82921 87 aaKnown RBP2.77□□□□□ -1.97
CALD1-216ENST00000473714 SHC2P98077 582 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 RHDQ02161 417 aa2.77□□□□□ -1.97
CALD1-216ENST00000473714 ALDH6A1Q02252 535 aaKnown RBP2.77□□□□□ -1.97
CALD1-216ENST00000473714 FPGSQ05932 587 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms