RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 TARDBPQ13148 414 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAIP-202ENST00000469027 PRPF4BQ13523 1007 aaKnown RBP11.54□□□□□ -0.56
TRAIP-202ENST00000469027 PTPRNQ16849 979 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 HLA-BQ31612 363 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 TXNDC8Q6A555 127 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 IL27RAQ6UWB1 636 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 DHX32Q7L7V1 743 aaKnown RBP11.54□□□□□ -0.56
TRAIP-202ENST00000469027 ZBTB8OSQ8IWT0 167 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 RASEFQ8IZ41 740 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
TRAIP-202ENST00000469027 SUSD3Q96L08 255 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 LXNQ9BS40 222 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 NRSN2Q9GZP1 204 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 SLC38A7Q9NVC3 462 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 TIMM13Q9Y5L4 95 aaPredicted RBP11.54□□□□□ -0.56
TRAIP-202ENST00000469027 KNL1Q8NG31 2342 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 NID2Q14112 1375 aa11.54□□□□□ -0.56
TRAIP-202ENST00000469027 SMIM28A0A1B0GU29 152 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 MTMR11A4FU01 709 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 ZBTB39O15060 712 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 OPRD1P41143 372 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 CDR1P51861 262 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 YARSP54577 528 aaKnown RBP11.53□□□□□ -0.56
TRAIP-202ENST00000469027 NFKB2Q00653 900 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 RTP5Q14D33 572 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 EML3Q32P44 896 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 HSF5Q4G112 596 aaPredicted RBP11.53□□□□□ -0.56
TRAIP-202ENST00000469027 EMC10Q5UCC4 262 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 CENPPQ6IPU0 288 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 USP37Q86T82 979 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 ZNF248Q8NDW4 579 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 GIPC2Q8TF65 315 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 FOXJ1Q92949 421 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 POLR3FQ9H1D9 316 aaPredicted RBP11.53□□□□□ -0.56
TRAIP-202ENST00000469027 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 GMIPQ9P107 970 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 FTSJ1Q9UET6 329 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 PCDHB8Q9UN66 801 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 USP20Q9Y2K6 914 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 PCDHGB2Q9Y5G2 931 aa11.53□□□□□ -0.56
TRAIP-202ENST00000469027 USP9YO00507 2555 aaPredicted RBP11.53□□□□□ -0.56
TRAIP-202ENST00000469027 PRPF3O43395 683 aaKnown RBP11.52□□□□□ -0.57
TRAIP-202ENST00000469027 ZNF217O75362 1048 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 TDP2O95551 362 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 NFATC1O95644 943 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 APODP05090 189 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 GABRG2P18507 467 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 CR2P20023 1033 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 DDX6P26196 483 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAIP-202ENST00000469027 GRK6P43250 576 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 GPR17Q13304 367 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 TBC1D25Q3MII6 688 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 DCAF4L1Q3SXM0 396 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 MGAT5BQ3V5L5 792 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 Q4G0T1 1027 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 KIAA1614Q5VZ46 1190 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 EEF1DP3Q658K8 133 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 USP49Q70CQ1 688 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 ERICH1Q86X53 443 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 SFTPA1Q8IWL2 248 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 C4orf19Q8IY42 314 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 MRPS31Q92665 395 aaKnown RBP11.52□□□□□ -0.57
TRAIP-202ENST00000469027 ERLEC1Q96DZ1 483 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 TRPC7Q9HCX4 862 aa11.52□□□□□ -0.57
TRAIP-202ENST00000469027 MYMKA6NI61 221 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 OR6C75A6NL08 312 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 ADAM23O75077 832 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 ARL2P36404 184 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 PCBP4P57723 403 aaKnown RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 FAM160A1Q05DH4 1040 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 VAC14Q08AM6 782 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 NTRK3Q16288 839 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 INF2Q27J81 1249 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 TSGA10IPQ3SY00 556 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 HES3Q5TGS1 186 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 MAEAQ7L5Y9 396 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 ZNF419Q96HQ0 510 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 FZD8Q9H461 694 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 TOPORSQ9NS56 1045 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 VPS54Q9P1Q0 977 aa11.51□□□□□ -0.57
TRAIP-202ENST00000469027 NAP1L2Q9ULW6 460 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 SPTBN1Q01082 2364 aaKnown RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 MYO18AQ92614 2054 aaKnown RBP11.51□□□□□ -0.57
TRAIP-202ENST00000469027 CYP3A7-CYP3A51PA0A087WV96 503 aa11.5□□□□□ -0.57
TRAIP-202ENST00000469027 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
TRAIP-202ENST00000469027 DGAT1O75907 488 aa11.5□□□□□ -0.57
TRAIP-202ENST00000469027 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
TRAIP-202ENST00000469027 CKMP06732 381 aa11.5□□□□□ -0.57
TRAIP-202ENST00000469027 CPA1P15085 419 aa11.5□□□□□ -0.57
TRAIP-202ENST00000469027 CYP3A7P24462 503 aa11.5□□□□□ -0.57
TRAIP-202ENST00000469027 RPL9P32969 192 aaKnown RBP11.5□□□□□ -0.57
TRAIP-202ENST00000469027 HSPA4P34932 840 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms