RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ERBB2P04626 1255 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
SLX4-202ENST00000466154 MCL1Q07820 350 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 TFDP1Q14186 410 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 OR6B2Q6IFH4 312 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 C1orf228Q6PIY5 440 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 CENPUQ71F23 418 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 C1orf127Q8N9H9 656 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 PYROXD1Q8WU10 500 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 XYLT2Q9H1B5 865 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 KDM4CQ9H3R0 1056 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 TRABDQ9H4I3 376 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 ZNF408Q9H9D4 720 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 SLCO1B3Q9NPD5 702 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 SSC5DA1L4H1 1573 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 POLR2AP24928 1970 aaKnown RBP17.19■□□□□ 0.34
SLX4-202ENST00000466154 ZBTB42B2RXF5 422 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
SLX4-202ENST00000466154 SNCBQ16143 134 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 HIF1AQ16665 826 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 NLRP7Q8WX94 980 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 MAK16Q9BXY0 300 aaKnown RBP17.19■□□□□ 0.34
SLX4-202ENST00000466154 ARID2Q68CP9 1835 aa17.19■□□□□ 0.34
SLX4-202ENST00000466154 LOC102724159A0A0B4J2E5 919 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 ACKR2O00590 384 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 RNF8O76064 485 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 ITGBL1O95965 494 aaPredicted RBP17.18■□□□□ 0.34
SLX4-202ENST00000466154 CYP2C8P10632 490 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 PWP2Q15269 919 aaKnown RBP17.18■□□□□ 0.34
SLX4-202ENST00000466154 C15orf59Q2T9L4 293 aaPredicted RBP17.18■□□□□ 0.34
SLX4-202ENST00000466154 C12orf29Q8N999 325 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 SMC6Q96SB8 1091 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 ECT2Q9H8V3 914 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 GPATCH2LQ9NWQ4 482 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.34
SLX4-202ENST00000466154 CNTN6Q9UQ52 1028 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 LSM8O95777 96 aaKnown RBP17.18■□□□□ 0.34
SLX4-202ENST00000466154 TGFB3P10600 412 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 AP3M2P53677 418 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 MCCD1P59942 119 aaPredicted RBP17.18■□□□□ 0.34
SLX4-202ENST00000466154 TNFAIP8L3Q5GJ75 292 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 UNC45BQ8IWX7 931 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 RMDN2Q96LZ7 410 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 MPHOSPH6Q99547 160 aaKnown RBP17.18■□□□□ 0.34
SLX4-202ENST00000466154 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 SIX4Q9UIU6 781 aa17.18■□□□□ 0.34
SLX4-202ENST00000466154 TCRBV7S3A2A0A539 114 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 FAM47DPA6NHR8 397 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 F5H423 210 aaPredicted RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 RASSF9O75901 435 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 NEFHP12036 1026 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 INSRRP14616 1297 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 EIF4BP23588 611 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 FOXN2P32314 431 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 IL9RQ01113 521 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 FAXCQ5TGI0 409 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 PALM2Q8IXS6 379 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 ARFGAP1Q8N6T3 406 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 CKAP2Q8WWK9 683 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 HEY1Q9Y5J3 304 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 MICAL2O94851 1124 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 MIPP30301 263 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 RPA3P35244 121 aaPredicted RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 RAD23BP54727 409 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 EIF3EP60228 445 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 KCNJ2P63252 427 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 MYO1EQ12965 1108 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 AMHR2Q16671 573 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 C3orf62Q6ZUJ4 267 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 FAM49BQ9NUQ9 324 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 KLHL14Q9P2G3 628 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 RLFQ13129 1914 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 MED7O43513 233 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 IREB2P48200 963 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 CDH6P55285 790 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 PTPN11Q06124 597 aaPredicted RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 ITIH4Q14624 930 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 MSS51Q4VC12 460 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 FNBP1LQ5T0N5 605 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 HHATQ5VTY9 493 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 DARS2Q6PI48 645 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 GPC2Q8N158 579 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 SPATA18Q8TC71 538 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 SGSM3Q96HU1 749 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 PIWIL1Q96J94 861 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 ELOVL4Q9GZR5 314 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 NGRNQ9NPE2 291 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.17■□□□□ 0.34
SLX4-202ENST00000466154 DDX56Q9NY93 547 aaKnown RBP17.17■□□□□ 0.34
SLX4-202ENST00000466154 STRIP2Q9ULQ0 834 aa17.17■□□□□ 0.34
SLX4-202ENST00000466154 H7C0C1 242 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 EDNRBP24530 442 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 GBP2P32456 591 aaPredicted RBP17.16■□□□□ 0.34
SLX4-202ENST00000466154 ATP5OP48047 213 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms