RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 CDH22Q9UJ99 828 aa19.69■□□□□ 0.74
SCAMP3-204ENST00000465312 USP15Q9Y4E8 981 aaPredicted RBP19.69■□□□□ 0.74
SCAMP3-204ENST00000465312 CLDN5O00501 218 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 MBTPS2O43462 519 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 VNN2O95498 520 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 CCDC130P13994 396 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 MTHFRP42898 656 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 KCNQ1P51787 676 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 SYCP1Q15431 976 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 FAM171BQ6P995 826 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 ENOSF1Q7L5Y1 443 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 GIPC2Q8TF65 315 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 TMEM176AQ96HP8 235 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 FUBP3Q96I24 572 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 ZNF512Q96ME7 567 aaPredicted RBP19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 PKMYT1Q99640 499 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 CRISPLD1Q9H336 500 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 FAM207AQ9NSI2 230 aaPredicted RBP19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 DNAJC12Q9UKB3 198 aa19.68■□□□□ 0.74
SCAMP3-204ENST00000465312 BRWD1Q9NSI6 2320 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 HOXA9P31269 272 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 RPL10AP62906 217 aaKnown RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 FANCCQ00597 558 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 DDR2Q16832 855 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 PUS10Q3MIT2 529 aaKnown RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 RTL10Q7L3V2 364 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 GRASPQ7Z6J2 395 aaPredicted RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 GPR149Q86SP6 731 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 FAM35AQ86V20 835 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 C12orf29Q8N999 325 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 RBBP8NLQ8NC74 664 aaPredicted RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 CMASQ8NFW8 434 aaPredicted RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 NEK11Q8NG66 645 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 SLC2A14Q8TDB8 520 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 GPR152Q8TDT2 470 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 ATXN2LQ8WWM7 1075 aaKnown RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 CORO1BQ9BR76 489 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 B3GNT5Q9BYG0 378 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 ZNF518BQ9C0D4 1074 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 FAM124BQ9H5Z6 455 aaPredicted RBP19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 ABCB6Q9NP58 842 aa19.67■□□□□ 0.74
SCAMP3-204ENST00000465312 GRXCR2A6NFK2 248 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 SP100P23497 879 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 GPR15P49685 360 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 KLK7P49862 253 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 RAD23BP54727 409 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 KCNMA1Q12791 1236 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 CBX2Q14781 532 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 CFAP221Q4G0U5 840 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 SDHAF4Q5VUM1 108 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 ITIH5Q86UX2 942 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 CRYBG2Q8N1P7 616 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 SLC4A11Q8NBS3 891 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 WHAMMQ8TF30 809 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 JAKMIP2Q96AA8 810 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 CYFIP2Q96F07 1278 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 SMARCD1Q96GM5 515 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 KREMEN1Q96MU8 473 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 S1PR5Q9H228 398 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 KRT82Q9NSB4 513 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 HSFX1Q9UBD0 423 aa19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 MAGED2Q9UNF1 606 aaPredicted RBP19.66■□□□□ 0.74
SCAMP3-204ENST00000465312 TRIM66O15016 1216 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 AP1G2O75843 785 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 MYL4P12829 197 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 IL9P15248 144 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 PTPN2P17706 415 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 UBASH3AP57075 661 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 IFRD2Q12894 506 aaPredicted RBP19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 PABPC1LQ4VXU2 614 aaKnown RBP19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 SGO2Q562F6 1265 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 STKLD1Q8NE28 680 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 FEZF2Q8TBJ5 459 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 ZNF707Q96C28 371 aaPredicted RBP19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 NECTIN4Q96NY8 510 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 SIX2Q9NPC8 291 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 ASAH2Q9NR71 780 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 HCFC1R1Q9NWW0 138 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 FHOD1Q9Y613 1164 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 COL6A3P12111 3177 aa19.65■□□□□ 0.74
SCAMP3-204ENST00000465312 LRRC10BA6NIK2 292 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 TPM3P06753 285 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 FAM200BP0CF97 657 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 ATF6P18850 670 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 POLR2FP61218 127 aaKnown RBP19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 NTHL1P78549 312 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 PTPN21Q16825 1174 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 CYP4A22Q5TCH4 519 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 KLHDC7AQ5VTJ3 777 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 VSTM1Q6UX27 236 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 CYP26C1Q6V0L0 522 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 PDZD4Q76G19 769 aaPredicted RBP19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 GET4Q7L5D6 327 aaPredicted RBP19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 APTXQ7Z2E3 356 aaKnown RBP19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 NLRC4Q9NPP4 1024 aa19.64■□□□□ 0.73
SCAMP3-204ENST00000465312 RTN4Q9NQC3 1192 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms