RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GTF2H3Q13889 308 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 ODF1Q14990 250 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 FAM102BQ5T8I3 360 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 TCEAL8Q8IYN2 117 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 MIER2Q8N344 545 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 PLA2G15Q8NCC3 412 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 GPR156Q8NFN8 814 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 JPH3Q8WXH2 748 aaPredicted RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 TSR2Q969E8 191 aaKnown RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 FAM122AQ96E09 287 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 SUCLG2Q96I99 432 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 AIFM3Q96NN9 605 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 ADI1Q9BV57 179 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 SEC61A2Q9H9S3 476 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 TXNRD2Q9NNW7 524 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 DDX4Q9NQI0 724 aaKnown RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 RBM12Q9NTZ6 932 aaKnown RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 IP6K2Q9UHH9 426 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 MAGEL2Q9UJ55 1249 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 CACNA1BQ00975 2339 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 PTPRSQ13332 1948 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 TPRP12270 2363 aaKnown RBP5.82□□□□□ -1.48
COPS3-204ENST00000462236 LRRC37A2A6NM11 1700 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 NAV1Q8NEY1 1877 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 NRP1O14786 923 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 ZRANB2O95218 330 aaKnown RBP eCLIP5.82□□□□□ -1.48
COPS3-204ENST00000462236 GASTP01350 101 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 JUNP05412 331 aaKnown RBP5.82□□□□□ -1.48
COPS3-204ENST00000462236 ZNF888P0CJ79 500 aaPredicted RBP5.82□□□□□ -1.48
COPS3-204ENST00000462236 HNRNPLP14866 589 aaKnown RBP eCLIP5.82□□□□□ -1.48
COPS3-204ENST00000462236 FOSL2P15408 326 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 CYP2B6P20813 491 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 HGFACQ04756 655 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 ADAM15Q13444 863 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 RRP1BQ14684 758 aaKnown RBP5.82□□□□□ -1.48
COPS3-204ENST00000462236 CCL14Q16627 93 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 VMACQ2NL98 169 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 CAVIN4Q5BKX8 364 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 CCDC181Q5TID7 509 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 ANKRD44Q8N8A2 993 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 SNX33Q8WV41 574 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 SOCS4Q8WXH5 440 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 RABGGTAQ92696 567 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 OSBPL5Q9H0X9 879 aaPredicted RBP5.82□□□□□ -1.48
COPS3-204ENST00000462236 GEMIN8Q9NWZ8 242 aaKnown RBP5.82□□□□□ -1.48
COPS3-204ENST00000462236 SCN5AQ14524 2016 aa5.82□□□□□ -1.48
COPS3-204ENST00000462236 USP34Q70CQ2 3546 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 IL16Q14005 1332 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 C2orf78A6NCI8 922 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 GOLGA6CA6NDK9 693 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 GOLGA6BA6NDN3 693 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 MARCH6O60337 910 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 TMEM127O75204 238 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 IL33O95760 270 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 SCGB1D2O95969 90 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 HOXC6P09630 235 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 GOLGA6DP0CG33 693 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 VSIG10L2P0DP72 767 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 CTSSP25774 331 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 ITGB8P26012 769 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 ADCY7P51828 1080 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 HMGCS2P54868 508 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 RHBDL3P58872 404 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 WDR43Q15061 677 aaKnown RBP eCLIP5.81□□□□□ -1.48
COPS3-204ENST00000462236 NT5DC1Q5TFE4 455 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 FMNL3Q8IVF7 1028 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 RAVER1Q8IY67 606 aaKnown RBP5.81□□□□□ -1.48
COPS3-204ENST00000462236 ZNF384Q8TF68 577 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 ATXN2LQ8WWM7 1075 aaKnown RBP5.81□□□□□ -1.48
COPS3-204ENST00000462236 LPAR1Q92633 364 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 LBHD1Q9BQE6 289 aaPredicted RBP5.81□□□□□ -1.48
COPS3-204ENST00000462236 SENP6Q9GZR1 1112 aaPredicted RBP5.81□□□□□ -1.48
COPS3-204ENST00000462236 KIAA1683Q9H0B3 1180 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 PORCNQ9H237 461 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 USP40Q9NVE5 1235 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 GOLGA6AQ9NYA3 693 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 FLRT1Q9NZU1 646 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 TUBD1Q9UJT1 453 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 FAM184BQ9ULE4 1060 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 NR2E1Q9Y466 385 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 CFAP54Q96N23 3096 aa5.81□□□□□ -1.48
COPS3-204ENST00000462236 TECTAO75443 2155 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 TRIM43BA6NCK2 446 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 DNM1LO00429 736 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 B4GALT3O60512 393 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 CNMDO75829 334 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 ALDH1A2O94788 518 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 ENDOD1O94919 500 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 NBPF7P0C2Y1 421 aaPredicted RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 PF4V1P10720 104 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 ZKSCAN1P17029 563 aaPredicted RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 MAPK4P31152 587 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 RGS2P41220 211 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 RFX5P48382 616 aaPredicted RBP5.8□□□□□ -1.48
COPS3-204ENST00000462236 EPHB4P54760 987 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 RRADP55042 308 aa5.8□□□□□ -1.48
COPS3-204ENST00000462236 PPP2CBP62714 309 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms