RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TARS2Q9BW92 718 aaKnown RBP20.42■□□□□ 0.86
SNX27-204ENST00000458013 DPP3Q9NY33 737 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 PSMD3O43242 534 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 RHOBTB3O94955 611 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 KLRK1P26718 216 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 PDIA5Q14554 519 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 USP6NLQ92738 828 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 PCDHB8Q9UN66 801 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 MT-CO1P00395 513 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 SOX10P56693 466 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 FGD2Q7Z6J4 655 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 KIF2CQ99661 725 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 PAK5Q9P286 719 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 MAP3K7CLP57077 242 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 ANTXR2P58335 489 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 KLHDC7AQ5VTJ3 777 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 STAMBPL1Q96FJ0 436 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 JMJD4Q9H9V9 463 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 HEATR9A2RTY3 570 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 STRNO43815 780 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 HARS2P49590 506 aaKnown RBP20.42■□□□□ 0.86
SNX27-204ENST00000458013 LRRC8BQ6P9F7 803 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 PCYOX1LQ8NBM8 494 aa20.42■□□□□ 0.86
SNX27-204ENST00000458013 RASSF9O75901 435 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 SERPINB9P50453 376 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 KYAT1Q16773 422 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 PPIL6Q8IXY8 311 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 FBXO36Q8NEA4 188 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 GLMNQ92990 594 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CMTM5Q96DZ9 223 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 SH3GL3Q99963 347 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 MTMR12Q9C0I1 747 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 POU1F1P28069 291 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 C11orf63Q6NUN7 778 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 TMEM8AQ9HCN3 771 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CHST12Q9NRB3 414 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 ITIH6Q6UXX5 1313 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 MAP3K4Q9Y6R4 1608 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 NDUFB5O43674 189 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CDH16O75309 829 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 KLHL2O95198 593 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 NR3C2P08235 984 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 GSSP48637 474 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 SCN3BQ9NY72 215 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 C16orf96A6NNT2 1141 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 NR5A2O00482 541 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 TRIM69Q86WT6 500 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CENPLQ8N0S6 344 aaPredicted RBP20.41■□□□□ 0.86
SNX27-204ENST00000458013 MTERF3Q96E29 417 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 KCNK16Q96T55 309 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 TMEM245Q9H330 911 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CCDC134Q9H6E4 229 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 WDCPQ9H6R7 721 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 HEY2Q9UBP5 337 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CCT8L1PA6NM43 557 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 SUPT7LO94864 414 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 TGM2P21980 687 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 SAMD7Q7Z3H4 446 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 ACOT1Q86TX2 421 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 FLCNQ8NFG4 579 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 ZKSCAN4Q969J2 545 aaPredicted RBP20.41■□□□□ 0.86
SNX27-204ENST00000458013 SCUBE2Q9NQ36 999 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 GGA3Q9NZ52 723 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 ARHGEF40Q8TER5 1519 aa20.41■□□□□ 0.86
SNX27-204ENST00000458013 CSDE1O75534 798 aaKnown RBP20.4■□□□□ 0.86
SNX27-204ENST00000458013 ORC2Q13416 577 aaPredicted RBP20.4■□□□□ 0.86
SNX27-204ENST00000458013 AGBL2Q5U5Z8 902 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 MXRA8Q9BRK3 442 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 TBC1D23Q9NUY8 699 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 PPP1R3GB7ZBB8 358 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 PTGISQ16647 500 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 STKLD1Q8NE28 680 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 PNPLA7Q6ZV29 1317 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 ZNF23P17027 643 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 EPHB2P29323 1055 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 PDK1Q15118 436 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 MIB1Q86YT6 1006 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 LINC00116Q8NCU8 138 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 GEMIN8Q9NWZ8 242 aaKnown RBP20.4■□□□□ 0.86
SNX27-204ENST00000458013 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 CYP2C9P11712 490 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 DSG1Q02413 1049 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 KRT75O95678 551 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 CDH18Q13634 790 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 ARMC6Q6NXE6 501 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 KCNH7Q9NS40 1196 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 GID8Q9NWU2 228 aa20.4■□□□□ 0.86
SNX27-204ENST00000458013 SNX17Q15036 470 aa20.39■□□□□ 0.86
SNX27-204ENST00000458013 ERAP2Q6P179 960 aa20.39■□□□□ 0.86
SNX27-204ENST00000458013 P3H2Q8IVL5 708 aa20.39■□□□□ 0.86
SNX27-204ENST00000458013 SEPT1Q8WYJ6 367 aa20.39■□□□□ 0.86
SNX27-204ENST00000458013 TUBGCP3Q96CW5 907 aa20.39■□□□□ 0.86
SNX27-204ENST00000458013 CTDNEP1O95476 244 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 ALDH1A3P47895 512 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 LAMC2Q13753 1193 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 TMED8Q6PL24 325 aaPredicted RBP20.39■□□□□ 0.85
SNX27-204ENST00000458013 MICU2Q8IYU8 434 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 TTC39CQ8N584 583 aa20.39■□□□□ 0.85
SNX27-204ENST00000458013 ABCB1P08183 1280 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms