RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 YWHAEP62258 255 aaKnown RBP17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 SCYL2Q6P3W7 929 aa17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 SPOCD1Q6ZMY3 1216 aa17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 ARFGAP1Q8N6T3 406 aa17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 C12orf50Q8NA57 414 aaPredicted RBP17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 C3orf20Q8ND61 904 aa17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 MRPL45Q9BRJ2 306 aaKnown RBP17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 PARP2Q9UGN5 583 aa17.72■□□□□ 0.43
LAPTM4B-201ENST00000445593 SGK1O00141 431 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 CETN2P41208 172 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 LINC01465Q8N7H1 131 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 TMEM40Q8WWA1 233 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 MIS12Q9H081 205 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 TSPAN16Q9UKR8 245 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 E5RJQ4 531 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 TREHO43280 583 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 LRCH4O75427 683 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 IFNAR2P48551 515 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 YARSP54577 528 aaKnown RBP17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 PPP2R2AP63151 447 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 SKOR1P84550 965 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 TAF1CQ15572 869 aaPredicted RBP17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 ANKRD23Q86SG2 305 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 TLK2Q86UE8 772 aa17.71■□□□□ 0.43
LAPTM4B-201ENST00000445593 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 A0A1B0GUA9 196 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 IGF2BP3O00425 579 aaKnown RBP eCLIP17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 MED7O43513 233 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 BANF1O75531 89 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 CYP3A5P20815 502 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 DRG2P55039 364 aaKnown RBP17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 BYSLQ13895 437 aaKnown RBP17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 CCDC142Q17RM4 750 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 CCDC33Q8N5R6 958 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 OR6B3Q8NGW1 331 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 BCO2Q9BYV7 579 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 GPATCH2LQ9NWQ4 482 aa17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 RRP15Q9Y3B9 282 aaKnown RBP17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.71■□□□□ 0.42
LAPTM4B-201ENST00000445593 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 SCN1AP35498 2009 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 ARSEP51690 589 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 GPS1Q13098 491 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 FAM110CQ1W6H9 321 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 TAX1BP1Q86VP1 789 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 XYLT1Q86Y38 959 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 RNF217Q8TC41 542 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 TCRBV5S1A1TA0A578 114 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 IVDP26440 423 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 HOXA11P31270 313 aaPredicted RBP17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 ZNF157P51786 506 aaPredicted RBP17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 MMRN1Q13201 1228 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 GOLGA7BQ2TAP0 167 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 HOOK3Q86VS8 718 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 CXorf38Q8TB03 319 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 GRK7Q8WTQ7 553 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 B3GNT5Q9BYG0 378 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 NMRK2Q9NPI5 230 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 MORF4L1Q9UBU8 362 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 PCDHGC3Q9UN70 934 aa17.7■□□□□ 0.42
LAPTM4B-201ENST00000445593 RASGRF2O14827 1237 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 CST8O60676 142 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 CREB1P16220 341 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 RBP5P82980 135 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 LRRC14Q15048 493 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 MAIP1Q8WWC4 291 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 RBM41Q96IZ5 413 aaKnown RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 DPEP3Q9H4B8 488 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 ASB7Q9H672 318 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 YY1AP1Q9H869 796 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 RECQL4O94761 1208 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 TJP3O95049 919 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 ADORA2BP29275 332 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 PTK6Q13882 451 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 CCNG2Q16589 344 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 PTGISQ16647 500 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 PPP1R26Q5T8A7 1209 aaPredicted RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 CST9Q5W186 159 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 RCOR2Q8IZ40 523 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 GCOM2Q9BZD3 368 aaPredicted RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 NGRNQ9NPE2 291 aaKnown RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 TRIP12Q14669 1992 aaPredicted RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 RARGP13631 454 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 P4HA1P13674 534 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 ZNF618Q5T7W0 954 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 RFX6Q8HWS3 928 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 EGFL6Q8IUX8 553 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 SCUBE3Q8IX30 993 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 KCTD6Q8NC69 237 aa17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 GTF3C2Q8WUA4 911 aaPredicted RBP17.69■□□□□ 0.42
LAPTM4B-201ENST00000445593 LIASO43766 372 aa17.68■□□□□ 0.42
LAPTM4B-201ENST00000445593 GAD2Q05329 585 aa17.68■□□□□ 0.42
LAPTM4B-201ENST00000445593 SLMAPQ14BN4 828 aa17.68■□□□□ 0.42
LAPTM4B-201ENST00000445593 TFDP3Q5H9I0 405 aa17.68■□□□□ 0.42
LAPTM4B-201ENST00000445593 PPP1R15BQ5SWA1 713 aa17.68■□□□□ 0.42
LAPTM4B-201ENST00000445593 ACTL9Q8TC94 416 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms