RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 NIPA2Q8N8Q9 360 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CPXM1Q96SM3 734 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 WDR83Q9BRX9 315 aaKnown RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 MAK16Q9BXY0 300 aaKnown RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 METTL5Q9NRN9 209 aaKnown RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 HMGXB4Q9UGU5 601 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 PHTF1Q9UMS5 762 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 PCDHGC3Q9UN70 934 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 ZBTB42B2RXF5 422 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CSDE1O75534 798 aaKnown RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 CXCL8P10145 99 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CDH5P33151 784 aaPredicted RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 PTPN7P35236 360 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 TAP1Q03518 808 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 GRM1Q13255 1194 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 NEDD9Q14511 834 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 ACCSLQ4AC99 568 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 SYCP2LQ5T4T6 812 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CDCA2Q69YH5 1023 aaPredicted RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 METTL7BQ6UX53 244 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 TDRPQ86YL5 185 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 ZBTB8OSQ8IWT0 167 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CPT1BQ92523 772 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 SYNCQ9H7C4 482 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 SHOC2Q9UQ13 582 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 FZD9O00144 591 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 PRPF4O43172 522 aaKnown RBP eCLIP13.24□□□□□ -0.295e-7■□□□□ 9.2
TRO-215ENST00000445561 ERBB2P04626 1255 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 PGK2P07205 417 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 FGFR1P11362 822 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 KRT4P19013 534 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 EDNRBP24530 442 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 SLC8A1P32418 973 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 SPARCL1Q14515 664 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
TRO-215ENST00000445561 IER5Q5VY09 327 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 HSPH1Q92598 858 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 TWNKQ96RR1 684 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 NCAPGQ9BPX3 1015 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 C12orf65Q9H3J6 166 aaKnown RBP13.24□□□□□ -0.29
TRO-215ENST00000445561 PIK3R2O00459 728 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 TNNC2P02585 160 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 EZRP15311 586 aaKnown RBP13.24□□□□□ -0.29
TRO-215ENST00000445561 KDELR1P24390 212 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 NR1H3Q13133 447 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 VGLL4Q14135 290 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 ATF7IP2Q5U623 682 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 UNC45BQ8IWX7 931 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 AGAP11Q8TF27 550 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 PYROXD1Q8WU10 500 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 STAMBPL1Q96FJ0 436 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 MYLK2Q9H1R3 596 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 SMYD3Q9H7B4 428 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 UBN1Q9NPG3 1134 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 PSMC3IPQ9P2W1 217 aaPredicted RBP13.24□□□□□ -0.29
TRO-215ENST00000445561 MCM8Q9UJA3 840 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 STRIP2Q9ULQ0 834 aa13.24□□□□□ -0.29
TRO-215ENST00000445561 SIGLEC16A6NMB1 481 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 GOLGA8RI6L899 631 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 NFICP08651 508 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 RPL22P35268 128 aaKnown RBP13.23□□□□□ -0.29
TRO-215ENST00000445561 YWHAEP62258 255 aaKnown RBP13.23□□□□□ -0.29
TRO-215ENST00000445561 MXD4Q14582 209 aaPredicted RBP13.23□□□□□ -0.29
TRO-215ENST00000445561 MPZL3Q6UWV2 235 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 FAM71DQ8N9W8 422 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRO-215ENST00000445561 RSAD2Q8WXG1 361 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 ERP27Q96DN0 273 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 KLF6Q99612 283 aaPredicted RBP13.23□□□□□ -0.29
TRO-215ENST00000445561 SIX4Q9UIU6 781 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 RABGEF1Q9UJ41 708 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 WDR91A4D1P6 747 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 NOP56O00567 594 aaKnown RBP13.23□□□□□ -0.29
TRO-215ENST00000445561 TYROBPO43914 113 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 TMEM63AO94886 807 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 IQCF3P0C7M6 154 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 CLCN3P51790 818 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 RAD23BP54727 409 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
TRO-215ENST00000445561 RAB6CQ53S08 254 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 LVRNQ6Q4G3 990 aa13.23□□□□□ -0.29
TRO-215ENST00000445561 XYLT1Q86Y38 959 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms