RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 UBE2TQ9NPD8 197 aaPredicted RBP12.7□□□□□ -0.38
EBF3-203ENST00000440978 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
EBF3-203ENST00000440978 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
EBF3-203ENST00000440978 HMGXB4Q9UGU5 601 aa12.7□□□□□ -0.38
EBF3-203ENST00000440978 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
EBF3-203ENST00000440978 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
EBF3-203ENST00000440978 A0A1B0GTH6 734 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 RFPL2O75678 378 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 SERPINC1P01008 464 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 HAPLN1P10915 354 aaPredicted RBP12.69□□□□□ -0.38
EBF3-203ENST00000440978 ACO1P21399 889 aaKnown RBP12.69□□□□□ -0.38
EBF3-203ENST00000440978 MTHFRP42898 656 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
EBF3-203ENST00000440978 CYP27A1Q02318 531 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 MGAT5BQ3V5L5 792 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 TMC5Q6UXY8 1006 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 C12orf76Q8N812 135 aaPredicted RBP12.69□□□□□ -0.38
EBF3-203ENST00000440978 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
EBF3-203ENST00000440978 KREMEN1Q96MU8 473 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 SEPT5Q99719 369 aaPredicted RBP12.69□□□□□ -0.38
EBF3-203ENST00000440978 CRISPLD1Q9H336 500 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 SIX2Q9NPC8 291 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 CNTN6Q9UQ52 1028 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 ASB3Q9Y575 518 aa12.69□□□□□ -0.38
EBF3-203ENST00000440978 MBTPS2O43462 519 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 PAEPP09466 180 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 RAD23BP54727 409 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 EPHB3P54753 998 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 FANCCQ00597 558 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 TWF1Q12792 350 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 VEPH1Q14D04 833 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 SYCP1Q15431 976 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 CLUL1Q15846 466 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 ZNF394Q53GI3 561 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 KLHDC7AQ5VTJ3 777 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 IQCEQ6IPM2 695 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 DPY19L2P1Q6NXN4 242 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 TMEM270Q6UE05 265 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 ITIH5Q86UX2 942 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 SLC4A11Q8NBS3 891 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 SHC3Q92529 594 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 SUSD6Q92537 303 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 SMG7Q92540 1137 aaKnown RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 KAT5Q92993 513 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 ZNF512Q96ME7 567 aaPredicted RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 HEXIM2Q96MH2 286 aaKnown RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 HNRNPABQ99729 332 aaKnown RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 LSM14BQ9BX40 385 aaKnown RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 B3GNT5Q9BYG0 378 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 PIDD1Q9HB75 910 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 DNAJC12Q9UKB3 198 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 SIK3Q9Y2K2 1263 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
EBF3-203ENST00000440978 PCDHB4Q9Y5E5 795 aa12.68□□□□□ -0.38
EBF3-203ENST00000440978 A0A1W2PQC6 194 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 TRIM66O15016 1216 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 CCL16O15467 120 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 TPM3P06753 285 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 UCHL3P15374 230 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 PTPN2P17706 415 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 ATF6P18850 670 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 BDNFP23560 247 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 CYP2F1P24903 491 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 ZNF132P52740 706 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 TFF2Q03403 129 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 ORC1Q13415 861 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 CBX2Q14781 532 aaPredicted RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 NR1I3Q14994 352 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 SMAD2Q15796 467 aaKnown RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 ARHGAP17Q68EM7 881 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 PTCRAQ6ISU1 281 aaPredicted RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 FAM35AQ86V20 835 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 FUKQ8N0W3 1084 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 TTC9BQ8N6N2 239 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 LEMD2Q8NC56 503 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 RBBP8NLQ8NC74 664 aaPredicted RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 NEK11Q8NG66 645 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 SLC2A14Q8TDB8 520 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 PSMG2Q969U7 264 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 CYFIP2Q96F07 1278 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 C8orf48Q96LL4 319 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 MED10Q9BTT4 135 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 NAA15Q9BXJ9 866 aaKnown RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 AVENQ9NQS1 362 aaPredicted RBP12.67□□□□□ -0.38
EBF3-203ENST00000440978 EHD2Q9NZN4 543 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 CEP72Q9P209 647 aa12.67□□□□□ -0.38
EBF3-203ENST00000440978 PTPRDP23468 1912 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms