RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TSPAN1O60635 241 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 VDRP11473 427 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 GRM5P41594 1212 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 RPL7AP62424 266 aaKnown RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 NFX1Q12986 1120 aaKnown RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 ACAP1Q15027 740 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 CNGA2Q16280 664 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 HADHQ16836 314 aaKnown RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 C6orf118Q5T5N4 469 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 LLGL2Q6P1M3 1020 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 DRICH1Q6PGQ1 229 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 SCARA5Q6ZMJ2 495 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 KIAA0319LQ8IZA0 1049 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 SH2D3CQ8N5H7 860 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 FNIP1Q8TF40 1166 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 CPB2Q96IY4 423 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 DEFB118Q96PH6 123 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 GCOM2Q9BZD3 368 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 FOXP3Q9BZS1 431 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 SETD4Q9NVD3 440 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 ASIC3Q9UHC3 531 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 CILPO75339 1184 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 KRT3P12035 628 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 MDH1P40925 334 aaKnown RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 ADCY2Q08462 1091 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 SNX1Q13596 522 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 BYSLQ13895 437 aaKnown RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 STILQ15468 1287 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 KRT71Q3SY84 523 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 ZFYVE27Q5T4F4 411 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 DENND1BQ6P3S1 775 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 POLNQ7Z5Q5 900 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 OR2W6PQ8NHA6 318 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 MCEEQ96PE7 176 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 TRAIPQ9BWF2 469 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 FRMD8P1Q9BZ68 369 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 ROPN1BQ9BZX4 212 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 RNF208Q9H0X6 261 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 STMN4Q9H169 189 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 ROPN1Q9HAT0 212 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 CHST7Q9NS84 486 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 DPP3Q9NY33 737 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDX56-204ENST00000431640 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 DRG1Q9Y295 367 aaKnown RBP13.54□□□□□ -0.24
DDX56-204ENST00000431640 EFR3BQ9Y2G0 817 aa13.54□□□□□ -0.24
DDX56-204ENST00000431640 NRCAMQ92823 1304 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 KRT7P08729 469 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 ATF2P15336 505 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 ADCY8P40145 1251 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 GABRB2P47870 512 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 ACLYP53396 1101 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
DDX56-204ENST00000431640 SLC4A11Q8NBS3 891 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 WNT8BQ93098 351 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 PGM2Q96G03 612 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 CCDC114Q96M63 670 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 SLITRK1Q96PX8 696 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 TSPAN18Q96SJ8 248 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
DDX56-204ENST00000431640 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 SYNCQ9H7C4 482 aa13.53□□□□□ -0.24
DDX56-204ENST00000431640 CNOT10Q9H9A5 744 aaKnown RBP13.53□□□□□ -0.24
DDX56-204ENST00000431640 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 MBLAC1A4D2B0 266 aaPredicted RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 CSDE1O75534 798 aaKnown RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 KRT1P04264 644 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 AXLP30530 894 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 ATP1A2P50993 1020 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 CDH8P55286 799 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 PSMC1P62191 440 aaKnown RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 PPP2R2AP63151 447 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 INCA1Q0VD86 236 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 SLC29A2Q14542 456 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 TFDP3Q5H9I0 405 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 HEXIM2Q96MH2 286 aaKnown RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 SPC25Q9HBM1 224 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 ANAPC5Q9UJX4 755 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 OGDHLQ9ULD0 1010 aa13.52□□□□□ -0.25
DDX56-204ENST00000431640 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
DDX56-204ENST00000431640 KAT6AQ92794 2004 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 A0A1W2PQ45 241 aaPredicted RBP13.51□□□□□ -0.25
DDX56-204ENST00000431640 A0A1W2PQY0 241 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 F8VP50 259 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 TREHO43280 583 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 PSMA2P25787 234 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 IVDP26440 423 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 RAP1GAPP47736 663 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms