RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 EXOSC9Q06265 439 aaKnown RBP5.93□□□□□ -1.46
PTPN4-204ENST00000431283 ZNF626Q68DY1 528 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 PPP1R3BQ86XI6 285 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 HESX1Q9UBX0 185 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 SERGEFQ9UGK8 458 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 SERTAD3Q9UJW9 196 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 SH2B3Q9UQQ2 575 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 COL4A3BPQ9Y5P4 624 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 PRDM2Q13029 1718 aa5.93□□□□□ -1.46
PTPN4-204ENST00000431283 CYP2D6P10635 497 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 JUPP14923 745 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 EPHB2P29323 1055 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 TOB1P50616 345 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-204ENST00000431283 TUBA4AP68366 448 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 GTF2H3Q13889 308 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 TMEM240Q5SV17 173 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 ARHGAP40Q5TG30 622 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 PRAMEF17Q5VTA0 474 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 ZNF425Q6IV72 752 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 CATIPQ7Z7H3 387 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 PRR18Q8N4B5 295 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPN4-204ENST00000431283 SLC35A4Q96G79 324 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 CDK5RAP3Q96JB5 506 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 PTDSS2Q9BVG9 487 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 GLOD4Q9HC38 313 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 SERHLQ9NQF3 203 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 HOMER2Q9NSB8 354 aa5.92□□□□□ -1.46
PTPN4-204ENST00000431283 TARBP1Q13395 1621 aaKnown RBP5.92□□□□□ -1.46
PTPN4-204ENST00000431283 SNAPC4Q5SXM2 1469 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 MAGI1Q96QZ7 1491 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-204ENST00000431283 H0YIZ8 118 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 MYO1CO00159 1063 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 BMP15O95972 392 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 IL6RP08887 468 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-204ENST00000431283 NPSP0C0P6 89 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 MPGP29372 298 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 PPIFP30405 207 aaKnown RBP5.91□□□□□ -1.46
PTPN4-204ENST00000431283 PTGER1P34995 402 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 ZNF134P52741 427 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 E2F2Q14209 437 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 MAVSQ7Z434 540 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 ZNF366Q8N895 744 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 RPL36ALQ969Q0 106 aaKnown RBP5.91□□□□□ -1.46
PTPN4-204ENST00000431283 MAP3K14Q99558 947 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 BHMT2Q9H2M3 363 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 SHOC2Q9UQ13 582 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 PLEKHM1Q9Y4G2 1056 aa5.91□□□□□ -1.46
PTPN4-204ENST00000431283 GRIN2BQ13224 1484 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 UNC5CO95185 931 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 FESP07332 822 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 GRPP07492 148 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 CT47B1P0C2W7 299 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-204ENST00000431283 ENGP17813 658 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 ITGB6P18564 788 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 PCSK6P29122 969 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 SOX8P57073 446 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 LILRA4P59901 499 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 BOP1Q14137 746 aaKnown RBP5.9□□□□□ -1.46
PTPN4-204ENST00000431283 PLS1Q14651 629 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 PROSER3Q2NL68 480 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 EMC10Q5UCC4 262 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 MORN5Q5VZ52 161 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 NAPRTQ6XQN6 538 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 YTHDF3Q7Z739 585 aaKnown RBP5.9□□□□□ -1.46
PTPN4-204ENST00000431283 NEK8Q86SG6 692 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 DENND1AQ8TEH3 1009 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 XAGE5Q8WWM1 108 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 CHMP4CQ96CF2 233 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 MVB12AQ96EY5 273 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 DLL3Q9NYJ7 618 aa5.9□□□□□ -1.46
PTPN4-204ENST00000431283 SYNJ2O15056 1496 aa5.9□□□□□ -1.47
PTPN4-204ENST00000431283 FGD5Q6ZNL6 1462 aa5.9□□□□□ -1.47
PTPN4-204ENST00000431283 SYNJ1O43426 1573 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 CHD1O14646 1710 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 PPP6CO00743 305 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 AKAP5P24588 427 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 LIPAP38571 399 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 TPTEP56180 551 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 HOXA4Q00056 320 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-204ENST00000431283 TBC1D25Q3MII6 688 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 SLC9A4Q6AI14 798 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 RGS7BPQ6MZT1 257 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-204ENST00000431283 PARS2Q7L3T8 475 aaKnown RBP5.89□□□□□ -1.47
PTPN4-204ENST00000431283 RP9Q8TA86 221 aaKnown RBP5.89□□□□□ -1.47
PTPN4-204ENST00000431283 GTPBP4Q9BZE4 634 aaKnown RBP5.89□□□□□ -1.47
PTPN4-204ENST00000431283 DUSP22Q9NRW4 184 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 PCDHA6Q9UN73 950 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 ADAMTS5Q9UNA0 930 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 TBC1D30Q9Y2I9 924 aa5.89□□□□□ -1.47
PTPN4-204ENST00000431283 WDR97A6NE52 1622 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 DNAJB5O75953 348 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 TUBB4AP04350 444 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 HDCP19113 662 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 IBSPP21815 317 aaPredicted RBP5.88□□□□□ -1.47
PTPN4-204ENST00000431283 PLCD1P51178 756 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 SLC18B1Q6NT16 456 aa5.88□□□□□ -1.47
PTPN4-204ENST00000431283 GRAMD1CQ8IYS0 662 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms