RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 LRGUKQ96M69 825 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 SRPK1Q96SB4 655 aaKnown RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 HOXC10Q9NYD6 342 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 ATP8B3O60423 1300 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 C10orf71Q711Q0 1435 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 COL5A3P25940 1745 aaPredicted RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 TESPA1A2RU30 521 aaPredicted RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L15C9J2P7 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L13C9JLJ4 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L11C9JVI0 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L18D6R9N7 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L22D6RA61 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L17D6RBQ6 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L19D6RCP7 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L20D6RJB6 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 DDX39AO00148 427 aaKnown RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 XPO1O14980 1071 aaKnown RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 TEX28O15482 410 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 MX2P20592 715 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 HOXA13P31271 388 aaPredicted RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 ARHGAP4P98171 946 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L24Q0WX57 530 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 IRGQQ8WZA9 623 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 CNBD2Q96M20 576 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 SERPINB12Q96P63 405 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 TPK1Q9H3S4 243 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 TMEM206Q9H813 350 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 GIMAP4Q9NUV9 329 aa15.08■□□□□ 0
SYNGAP1-203ENST00000428982 TTC7AQ9ULT0 858 aaPredicted RBP15.08■□□□□ 0
SYNGAP1-203ENST00000428982 MROH7Q68CQ1 1323 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 C19orf81C9J6K1 198 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 EIF3DO15371 548 aaKnown RBP eCLIP15.07■□□□□ 0
SYNGAP1-203ENST00000428982 CDK4P11802 303 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 JMJD4Q9H9V9 463 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 APPL1Q9UKG1 709 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 WASF2Q9Y6W5 498 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 POC1B-GALNT4F8VUJ3 575 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 H3BRJ5 948 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 FKBP6O75344 327 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 CHEK2O96017 543 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 WDR72Q3MJ13 1102 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 METTL13Q8N6R0 699 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 CAPSLQ8WWF8 208 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 GIT1Q9Y2X7 761 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 TNFAIP8O95379 198 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 PRKCIP41743 596 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 HMGCS2P54868 508 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 C2orf69Q8N8R5 385 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 INPP4AQ96PE3 977 aaPredicted RBP15.07■□□□□ 0
SYNGAP1-203ENST00000428982 GOLPH3Q9H4A6 298 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 PRR12Q9ULL5 1215 aa15.07■□□□□ 0
SYNGAP1-203ENST00000428982 ENO2P09104 434 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 UQCRBP14927 111 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 EPHB1P54762 984 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 EVX2Q03828 476 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 ACVR2BQ13705 512 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 LIN9Q5TKA1 542 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 RPAP3Q9H6T3 665 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 BCAP29Q9UHQ4 241 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 MYH8P13535 1937 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 SYCE1LA8MT33 242 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 AP3B1O00203 1094 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 MAN1A2O60476 641 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 KRT5P13647 590 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 GFAPP14136 432 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 RPA1P27694 616 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 YARSP54577 528 aaKnown RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 CAV1Q03135 178 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 AUHQ13825 339 aaKnown RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 TTC39CQ8N584 583 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 SLC43A3Q8NBI5 491 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 PYROXD1Q8WU10 500 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 C7orf43Q8WVR3 580 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 IFT43Q96FT9 208 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 OTUD5Q96G74 571 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 SYT17Q9BSW7 474 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 DCUN1D5Q9BTE7 237 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 EBF3Q9H4W6 596 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 GPRC5DQ9NZD1 345 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 SH3PXD2BA1X283 911 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 CLIC2O15247 247 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 ITGA4P13612 1032 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 RAP1GDS1P52306 607 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 GALCP54803 685 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 UBXN2AP68543 259 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 NBPF12Q5TAG4 269 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 ACER1Q8TDN7 264 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 ITPKCQ96DU7 683 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 WNT8AQ9H1J5 351 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 HEY2Q9UBP5 337 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 RSL24D1Q9UHA3 163 aaKnown RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 DTNAQ9Y4J8 743 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 PFDN6O15212 129 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 CIITAP33076 1130 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 TCF7P36402 384 aaPredicted RBP15.06■□□□□ 0
SYNGAP1-203ENST00000428982 CCNA1P78396 465 aa15.06■□□□□ 0
SYNGAP1-203ENST00000428982 ERLEC1Q96DZ1 483 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms