RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 C4orf22Q6V702 233 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 GTF3C4Q9UKN8 822 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 C1orf232A0A0U1RR37 186 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 APOA4P06727 396 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 PTPAQ15257 358 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 LRRC74BQ6ZQY2 392 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 OMA1Q96E52 524 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 KCND2Q9NZV8 630 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 CEP170Q5SW79 1584 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
CLCN4-203ENST00000421085 SLC26A4O43511 780 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 STILQ15468 1287 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 ARMCX4Q5H9R4 360 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 MED15Q96RN5 788 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 FRMD8Q9BZ67 464 aaPredicted RBP12.83□□□□□ -0.36
CLCN4-203ENST00000421085 NDEL1Q9GZM8 345 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 LATS2Q9NRM7 1088 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 BCORL1Q5H9F3 1711 aa12.83□□□□□ -0.36
CLCN4-203ENST00000421085 H2AFYO75367 372 aaKnown RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 EPHB2P29323 1055 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 NME5P56597 212 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 DEFB107AQ8IZN7 70 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 ATP8B4Q8TF62 1192 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SPATA33Q96N06 139 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SEMA4AQ9H3S1 761 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 KIF1BO60333 1816 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 P4HA2O15460 535 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FSBPO95073 299 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SGPL1O95470 568 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 PPP3CCP48454 512 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SAMD9Q5K651 1589 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 DCUN1D1Q96GG9 259 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FAM84BQ96KN1 310 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 DCUN1D5Q9BTE7 237 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 TJP2Q9UDY2 1190 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 CYP27B1O15528 508 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 AP1G2O75843 785 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 ADARP55265 1226 aaKnown RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 KYAT1Q16773 422 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FAM83EQ2M2I3 478 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 TRIM65Q6PJ69 517 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 UBA3Q8TBC4 463 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 PABPC5Q96DU9 382 aaKnown RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 MAP3K14Q99558 947 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 MRPS26Q9BYN8 205 aaKnown RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 JPH1Q9HDC5 661 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FAM49BQ9NUQ9 324 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 TBX3O15119 743 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FAM153BP0C7A2 387 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 ELF3P78545 371 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FAM153CQ494X1 144 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 C11orf74Q86VG3 221 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SNX31Q8N9S9 440 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 RERGLQ9H628 205 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 SOX13Q9UN79 622 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 NAALADL1Q9UQQ1 740 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 RUVBL2Q9Y230 463 aaKnown RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 CNTNAP5Q8WYK1 1306 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 ZSCAN5CA6NGD5 496 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 H0YC42 278 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 DNALI1O14645 258 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 MAFGO15525 162 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 GPSM2P81274 684 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
CLCN4-203ENST00000421085 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
CLCN4-203ENST00000421085 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 TRIM24O15164 1050 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 TM9SF1O15321 606 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 DGAT1O75907 488 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 BCL10O95999 233 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 GRK2P25098 689 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 CHRNB3Q05901 458 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 SEL1L3Q68CR1 1132 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 EFL1Q7Z2Z2 1120 aaKnown RBP12.81□□□□□ -0.36
CLCN4-203ENST00000421085 SCFD2Q8WU76 684 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 CYLDQ9NQC7 956 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
CLCN4-203ENST00000421085 RIPK2O43353 540 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 STIP1P31948 543 aaKnown RBP12.81□□□□□ -0.36
CLCN4-203ENST00000421085 RBP5P82980 135 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 PWP1Q13610 501 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 TCHHL1Q5QJ38 904 aaPredicted RBP12.81□□□□□ -0.36
CLCN4-203ENST00000421085 DENND1BQ6P3S1 775 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 TMPRSS6Q8IU80 811 aa12.81□□□□□ -0.36
CLCN4-203ENST00000421085 HDAC7Q8WUI4 952 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms